Oenococcus oeni: OEOE_1313
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Entry
OEOE_1313 CDS
T00408
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ooe
Oenococcus oeni
Brite
KEGG Orthology (KO) [BR:
ooe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ooe03016
]
OEOE_1313
Enzymes [BR:
ooe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OEOE_1313
Transfer RNA biogenesis [BR:
ooe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OEOE_1313
Prokaryotic type
OEOE_1313
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
YfkD
Motif
Other DBs
NCBI-ProteinID:
ABJ57185
UniProt:
Q04ED7
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All DBs
Position
complement(1221338..1222234)
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AA seq
298 aa
AA seq
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MYNGIVLVDKPAGLTSFDVVAKLRKIFQQKQVGHTGTLDPSVTGLLVIVLGKATKLIDYL
QENQKQYRGTLILGLKTDTQDMDGQVTEMQFLKEAIADFKKKAAFDSFLGSSDQLPPMYS
AVKVGGKHLYELARKGETIERKSRKIKVMEFQQVGGSKFDASKGQEYINFVATVSKGTYI
RTLIEDFGAKLGLPATMMRLRRIEADGYDVKNSINLEEILASKTPRKFIIPMEKLLPTLP
KYSVGSDDWQLIKNGGWLKELPISVSPVKIFYNNSFQAIYEKQDGFYKPKKMLIHEDH
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggaattgttttggttgataagccagcaggtttgaccagttttgatgtggtt
gctaaattaagaaaaatattccaacaaaagcaagttggacacaccgggacacttgaccct
tctgttaccggattgcttgtgattgtactgggcaaagcaacgaaattaattgattatctt
caagaaaatcaaaagcaatatcgcggtactttgattctcggattaaaaaccgacacccag
gatatggatggtcaggtaactgagatgcagtttttaaaagaagcaatcgccgattttaaa
aaaaaagccgctttcgatagtttccttggaagttccgaccagcttccaccgatgtattcg
gctgttaaagttggtggaaaacatttatacgaattagctcgaaagggcgaaactatcgaa
cgaaaatccagaaaaataaaagtgatggaatttcaacaggttggcggttcaaaattcgat
gctagcaagggccaggaatatattaattttgttgcaactgtatcaaaaggaacttacata
cgaactctaatcgaagattttggcgcaaaattaggtttaccggccacaatgatgagactg
aggcgtatcgaggcggatggatacgatgttaaaaattcgattaatttagaagaaatatta
gccagcaaaacacctaggaaatttattattccaatggaaaagctcttaccaacgctaccg
aagtattcggttggcagcgatgactggcagcttattaaaaatggcggttggctaaaagaa
ttaccgatttctgtttcaccagttaaaattttttacaataatagttttcaggctatttat
gaaaaacaggatggattttataagccaaaaaagatgctgattcatgaagatcattaa
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