Oenococcus oeni: OEOE_1663
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Entry
OEOE_1663 CDS
T00408
Name
(GenBank) DNA polymerase III, epsilon subunit-like 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ooe
Oenococcus oeni
Pathway
ooe03030
DNA replication
ooe03430
Mismatch repair
ooe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ooe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OEOE_1663
03430 Mismatch repair
OEOE_1663
03440 Homologous recombination
OEOE_1663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ooe03032
]
OEOE_1663
03400 DNA repair and recombination proteins [BR:
ooe03400
]
OEOE_1663
Enzymes [BR:
ooe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OEOE_1663
DNA replication proteins [BR:
ooe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OEOE_1663
DNA repair and recombination proteins [BR:
ooe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OEOE_1663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNApol_Exo
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABJ57512
UniProt:
Q04DG0
LinkDB
All DBs
Position
complement(1583438..1583971)
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AA seq
177 aa
AA seq
DB search
MNFLAMDFETASSEPWSAVSLGLTIVRDNQIAQNWYSLIKPETSFSYWNTEINGLTADDV
LDSPKFPEVWADIKNLYDDYPVVVGHNVRFDNNVLKQTLKYYGLKTPRYLSLDTVSLPRK
FQPGMVNHKLDTVVSDLGLFLEHHHNASDDAQASAQILIYEIEHFGEERVKDFVKLV
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttggcaatggattttgaaactgccagtagtgaaccgtggtcggcggtctca
ttaggattaacaattgttcgtgataatcaaattgcacaaaattggtattcattgattaaa
ccggaaacttctttttcttattggaatacggaaattaatggtttgactgcagatgatgtc
ctcgattcaccgaaatttcctgaggtttgggctgatatcaagaatctatatgacgattac
ccagttgtagtcggtcacaatgttcgttttgacaacaacgtcttaaaacaaacactaaaa
tattacggcttgaaaaccccgcgttatttgagccttgacacagtttctcttccgcgaaag
ttccagccgggaatggttaatcacaagcttgatacggttgtttccgatttgggtcttttt
ttggaacatcatcataatgcatccgatgatgcccaggcgtcagcccagattcttatctat
gaaattgaacatttcggtgaagagcgagtgaaagattttgttaaattggtttag
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