Oenococcus oeni: OEOE_1788
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Entry
OEOE_1788 CDS
T00408
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ooe
Oenococcus oeni
Pathway
ooe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ooe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OEOE_1788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ooe03021
]
OEOE_1788
03400 DNA repair and recombination proteins [BR:
ooe03400
]
OEOE_1788
Transcription machinery [BR:
ooe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OEOE_1788
DNA repair and recombination proteins [BR:
ooe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OEOE_1788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF3295
Motif
Other DBs
NCBI-ProteinID:
ABJ57627
UniProt:
Q04D45
LinkDB
All DBs
Position
complement(1707477..1708064)
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AA seq
195 aa
AA seq
DB search
MVLKDNTKEQIAEFSNIELAREILNEKRKQTKFVDLLAALEKVRGEKFDEQTIVQIYTDL
NADGSFISMGENEWALRSWFAIDSINESIHEDLDEEDEKPKKKRGKKAAAVEDDVIGIDD
SDDDDDDVIDTDDDEDSDDSDDDDEDDTDSSNSNDSSAGSDSDEGEIKLNTNDESLDVLK
DKNDLDDLSDGDQEV
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggtactaaaagataacacaaaagaacaaattgcggaatttagcaacattgaattagct
cgtgagatattaaacgaaaagcgcaaacagacaaaattcgttgatttgttggctgctctt
gaaaaggttcgcggtgaaaaattcgacgaacaaacaattgttcagatttatacagattta
aatgctgatggatcttttatcagcatgggtgaaaatgaatgggctttgcgttcttggttt
gccattgattcaattaacgagtcgattcatgaagatctcgatgaagaagacgaaaagcca
aagaagaaacgcggcaagaaagctgctgcagtcgaagacgatgtgattggtatcgacgat
agcgatgatgatgacgacgatgtgatcgatactgatgatgacgaagactctgacgatagc
gatgatgatgacgaagacgataccgatagttcaaattcaaatgattcttcagctggaagc
gatagcgatgaaggcgaaattaaattaaatacaaacgatgaaagccttgatgtcctgaaa
gataaaaatgatcttgacgatttgagtgatggagaccaagaggtttaa
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