Otariodibacter oris: A6A10_01915
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Entry
A6A10_01915 CDS
T06287
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ooi
Otariodibacter oris
Pathway
ooi03420
Nucleotide excision repair
ooi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ooi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6A10_01915
03430 Mismatch repair
A6A10_01915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ooi03400
]
A6A10_01915
Enzymes [BR:
ooi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A6A10_01915
DNA repair and recombination proteins [BR:
ooi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6A10_01915
MMR (mismatch excision repair)
Other MMR factors
A6A10_01915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QGM80237
LinkDB
All DBs
Position
400084..402273
Genome browser
AA seq
729 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVAAPNGNYLVLAGAGSGKTRVLTHRIAWLIGVENIPESNILAV
TFTNKAAAEMRHRIEHTLSQSTHHRLFGMWVGTFHSIANRLLRSHYLDANLPQDFQIMDS
EDQNRLIKRLLKLHNIDEKHFPPKQVGWFINAQKDKGLRAKDIDHSEDQNTKKLVQIYQI
YQDACDRAGLLDFAELLIRTYELLKNNVHILQRYQQRFQQILIDEFQDTNNIQYDLIRLL
AGETGKVMIVGDDDQSIYGWRGAQVENIQRFLEDYPNAQTIRLEQNYRSTGNILNAANGL
ISNNDNRLGKNLWTDSGDGDPVDIYCAFNELDEARFVASQIKQWKEDEGELNQCTVLYRS
NSQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLISNRQDDAAFERVINTPPR
GIGDRTLETLRQLTRARQVTLWQAIQIGVQDEHLSGRAASALLRFVELINALEQETEQMS
LSEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLAELVSATKEFVKPEEAEDMSDLTAFLT
HASLEAGETQASPHQDYVELMTLHSAKGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERR
LAYVGITRAKRKLTLSYAESRRLYGKEERHLPSRFIAELPEKHIREVRLRGNINRPATFF
ANKQVKPTASMSSIVQNEWKMGQKVKHAKFGLGTIINVEGSGDQTRLQIAFVNQGIKWLI
AKMAKLEKQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggacttttctttattacttgatggcttaaacgataaacaacgagaagcagtggctgca
cctaatggaaattatttagtactagcaggtgcagggagtggtaaaactcgtgtgctgaca
catcgtatcgcttggcttatcggggtagagaatattccagaatctaacattttagcggta
acttttaccaataaagccgccgctgaaatgcgacatcgtatcgaacataccttatcccaa
tcaacacatcatcgtctatttggaatgtgggtcgggactttccatagcattgccaaccgc
ttgttacgctctcactatttagatgctaatcttcctcaagattttcagattatggatagt
gaagatcagaatcgtctaatcaaacgtctcttaaaattacacaatattgatgaaaaacat
tttccaccaaagcaagtaggctggtttatcaatgcacaaaaagataaggggttaagagcg
aaagatattgatcattccgaagatcaaaacacaaaaaaattggtgcagatttaccagatc
tatcaagatgcttgtgatcgtgcaggattattagattttgctgaattactgatccgcact
tatgaattattgaagaataatgtgcatatcctccaacgctatcaacaacgctttcaacag
atcctgattgatgagtttcaagataccaataatatccaatatgatttgattcgattgttg
gcgggagaaacaggtaaagtgatgattgtgggcgacgacgatcaatcaatttatggctgg
cgtggcgcacaagttgagaatattcaacgctttttagaagattaccccaatgcacaaact
attcgactagagcagaattatcgttcaacgggtaatatcttaaatgccgcaaatggattg
atttcaaataacgacaatcgcttaggtaaaaatttatggacggatagtggcgatggtgat
cccgttgatatttattgtgcctttaatgaattagatgaagctcgatttgttgcctcacaa
attaagcagtggaaagaagatgagggcgaattaaatcaatgtacggtgctttatcgcagt
aatagccaatcacgtgtgattgaagaagcgctaattcaagcgaatattccttaccgcatt
tatggcggtatgcgattctttgaacgccaagaaattaaagatgcactggcttacttacgc
cttatttctaatcgtcaagatgatgcggcatttgaacgtgttatcaatacaccaccaaga
gggataggtgatcgcaccttagaaacgttacgtcaacttactcgtgctcgccaagttacc
ctttggcaagcgattcaaattggtgtgcaagatgagcatttatctggcagagccgcctct
gcgttattacggtttgtggaactaataaacgcccttgagcaagaaacggagcaaatgtcc
ttatctgaacaaactgattttgtgattaaaaaatcaggcttatatgaaatgtataagcaa
gagaaaggcgaaaaaggggaagtgagaatcgaaaacttggcggagttagtcagtgccact
aaagaatttgtgaagcctgaagaagcagaagatatgagcgatctgaccgctttcttgacg
cacgcttcacttgaggcaggtgaaacacaagcctctccacatcaagattatgtggaatta
atgacgttacattcagcgaaaggcttagaatttccacgtgtgtttattgtcggggttgaa
gaaggcattttcccaagcggaatgagttttgacgaaggtcgtttacaagaagagcgtcgt
ttagcctatgtgggtattactcgagcaaaacgaaaattaaccttaagctatgcggaaagt
cgccgattatatggtaaagaagagcgtcatttaccttcccgtttcattgcagaattgcca
gaaaagcatatccgagaagtgagattacgtggcaatattaatcgtccagctacttttttt
gcaaataaacaggtgaaaccgaccgctagtatgagttctatcgttcaaaatgaatggaag
atggggcaaaaagtgaaacacgccaaatttggactaggtactattatcaatgttgaaggc
agtggcgatcaaacccgtttacaaattgcttttgtaaatcaagggattaaatggctcatt
gctaaaatggcaaaattagaaaaacaatag
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