KEGG   Otariodibacter oris: A6A10_02070
Entry
A6A10_02070       CDS       T06287                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ooi  Otariodibacter oris
Pathway
ooi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ooi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A6A10_02070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ooi03400]
    A6A10_02070
DNA repair and recombination proteins [BR:ooi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A6A10_02070
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A6A10_02070
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 AAA_22 RsgA_GTPase AAA_21 nSTAND3 DnaJ_CXXCXGXG BCA_ABC_TP_C AAA_23 AAA_25 cobW Viral_helicase1 NACHT
Other DBs
NCBI-ProteinID: QGM80265
LinkDB
Position
complement(437678..440506)
AA seq 942 aa
MQYIDIRGARTHNLKNINLTLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGQPRC
PDHDVPLEAQTISQMVDRVLEEPEGKRLMLLAPIVKDRKGEHVKLLENLTANGYIRARID
GEICDLSDPPKLELQKKHTIEVVVDRFKVRPDVGTRLAESFETALDLSGSTAVIADMDDP
TAEELTFSSSFACPHCGYSITELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVIQNAEI
SLANGAIKGWDKRSFYYFGLLKSVAKHYKFDIETPFCELPKKIQHIILNGSDEDIEFLYT
NDRGDTVKRVHPFEGILNNMARRYKETESNAVRDELAKYINNRPCTDCQGSRLRREARYV
FIDNTNLPIIAEKSIGEALTFFEELNLTGQRAKIAEKILKEIKERLQFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLLHLRNLGNTV
IVVEHDEDAIRAADHIVDIGPGAGVHGGQVIAQGTAEEIMQCEESLTGKFLSQQERIEIP
KQRVPYDATKLLTLTGASGNNLKNVNLEIPVGLFTCITGVSGSGKSTLINDTLFPLAQNA
LNRAENSDVAPYKSIDGLAHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYK
GKTIHQVLEMTVEEAREFFDAIPALARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLA
TELSKRDTGKTLYILDEPTTGLHFADIKQLLKVLHRLRDQGNTIVVIEHNLDVIKTADWI
VDLGPEGGSGGGQIIATGTPEQIAQDKKSHTARFLKQILAKG
NT seq 2829 nt   +upstreamnt  +downstreamnt
atgcagtatatcgacattcgtggtgcaagaacgcacaatcttaaaaatatcaatttaacc
ttaccaagagataaatttatcgtgattacaggactttctggatcgggtaaatcgtccttg
gcatttgataccctttatgcagaagggcaacgtcgctatgttgaatctctttctgcttat
gctcgtcaatttttatccttaatggaaaagcctgatgtggatcatatcgaggggctatct
ccagcaatttctattgagcaaaaatcgacctctcataatcctcgttcaacagtgggtaca
gtgacagaaattcacgattatttgcgattgttgtttgctcgtgtaggtcagcctcgttgc
cctgatcacgatgtccccttggaagctcaaaccatttcacaaatggtggatcgtgtattg
gaagaacctgagggtaagcgattaatgttactcgcaccaatagtgaaagatcgtaaaggg
gaacacgtaaaacttttggagaatctgaccgctaatggctatattcgcgcaagaattgat
ggggaaatatgtgatttatccgatccgccaaaattagaactacaaaaaaagcatacgatt
gaggtcgtggtcgatcgttttaaagtccgtcctgatgttggaacacgtttggctgaatcc
tttgaaacggcattagatctttctggatcaacagcagttattgccgatatggatgatcca
acagcagaagaattaaccttttcatctagctttgcttgccctcattgtggttattccatt
actgaattagaacctcgtttattctcatttaataatccagctggggcttgtcctacttgt
gatggtttgggtgttcagcaatattttgatgaacgtaaagtcatccaaaatgcagaaatc
tcccttgccaatggggcaattaaaggctgggataaacgcagtttttactattttggttta
ttaaaatctgtcgctaaacattataaatttgatattgaaacgcctttctgtgaactgccg
aaaaagattcagcacattattttaaatggctcagatgaagatattgagtttttatatacg
aacgataggggcgatacggttaagagagtgcatcctttcgaaggtattttaaataatatg
gctcgccgttataaagaaacggaatcgaatgcggtaagggatgaattagccaaatatatt
aataaccgcccttgtactgattgccaaggctctcgcttacgtcgtgaggcacgttacgtc
tttattgataatactaatttaccgattattgcggagaagagtattggcgaagcacttaca
ttcttcgaggaattaaatttaacaggacaacgagcaaaaattgcggaaaaaatcctcaaa
gaaattaaagaacgtctgcaattcttagtgaatgtagggctaaattatctctcgctttct
cgttcagcggaaaccttatcaggcggagaagcacaacgtattcgcctagcaagccaaatt
ggtgcaggattagtaggtgtgatgtatgtgttggatgagccatcaattggacttcaccaa
cgtgataatgagcgactgctcaatacattgttacacctcagaaatttaggtaataccgta
attgtggttgaacacgatgaagatgcgattcgagccgcagatcatattgtcgatattgga
ccgggtgcaggtgttcatggtggacaagtgattgcacagggtacggcagaagaaattatg
caatgtgaggaatcacttacagggaaattcctttctcaacaagaaagaattgagattcca
aaacaacgtgttccttacgatgcaacgaaattacttaccctaacaggtgcaagtggtaac
aatttaaaaaatgtgaatttagaaattccagttggattatttacgtgtatcacaggggta
tcaggttcaggtaaatctacccttatcaatgacacgttattcccgcttgcacaaaatgca
ttaaaccgtgcagaaaatagtgatgtcgcaccttataagagcattgatggattagcgcat
tttgataaggttattgatataaaccaaagcccgattggtcgcacaccgcgttcaaatcct
gcaacttatacgggcttatttactccgattcgtgagttatttgcgggaacacaagaagca
agagcaaggggctataatgtgggacgattcagctttaatgtgaaaggtggacgctgtgaa
gcgtgtcaaggcgatggagtaattaaggttgaaatgcactttttgccagatgtttacgtc
ccttgtgatcactgtaaaggcaaacgctataatcgtgaaaccttagaaattcgctataaa
ggcaaaacgattcatcaagtgttggaaatgaccgtagaagaagctcgagaattttttgac
gcgattcctgctctagcgagaaaattgcaaacattgattgacgttggattgtcttatatt
cgacttggacaatcatctacaaccctttcgggcggtgaagcgcaacgtgttaaactggct
acggagttgtctaaacgagatacaggaaaaaccttgtatattttagatgaacctacaaca
gggctacattttgcggacattaaacaattactcaaagttttgcatcgtttacgtgatcaa
ggtaatacgatcgttgtgattgagcataatttagatgtgattaaaactgccgactggatt
gtcgatttaggacctgaaggcggttctggtggtgggcaaataattgcaacaggtacacca
gaacaaattgctcaagacaaaaaatcacatacagcaagatttttaaaacaaatattagca
aaaggctaa

DBGET integrated database retrieval system