Otariodibacter oris: A6A10_03790
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Entry
A6A10_03790 CDS
T06287
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ooi
Otariodibacter oris
Brite
KEGG Orthology (KO) [BR:
ooi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ooi03016
]
A6A10_03790
Enzymes [BR:
ooi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A6A10_03790
Transfer RNA biogenesis [BR:
ooi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6A10_03790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QGM80581
LinkDB
All DBs
Position
827418..829397
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AA seq
659 aa
AA seq
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MFQNNPLLAQLKQQIEASKEYVEGIVKASDKSYGFLECDKETFFIPPPEMKKIMHGDKIR
ASVKRDGDKAQVEVDSLIEPMLNRFIAQVRFNKEGKLQLSVDHPNIKLSIPANTNKKVTE
KLAENDWVVAQLKNHPLRDDRFFFAQVTQFICQANDNFAPWWVTLAKHEQPREAVKGEAE
YHLHDELEREDLTNLYFTTIDSPSTQDMDDALYIEPIKQGEEQSGWCLVVAIADPTAYIP
ENSNIEKAARQRCFTNYLPGFNIPMLPRELSDELCSLVPNEKRPALVAYIEVDMSGEVIS
EPQFTSAWVESKAKLAYNDVSDFIEGNENHWVPENEETKQQIEWLHQFTQARMDWRAKNA
VIFKEQGDYSFELNEDGSVRDIHVEFRRIANQMIEESMILANICAAQYLDKYAHTGIFNT
HSGFDPKNLEAVKNFLLDTLSTDENRDELAERYSVERLATLEGYCEMRRDIADFPENFLD
MRLRRYLTFAEFKAQSAPHLGLGIEHYATWTSPIRKYGDMVNHRLIKQVLAHKATSAVEE
SILARLQEARKQNRMVERDIADWLYALYLAPMVEKNIEFDCEIQDVSRGGLRVKAIENGA
SIFIPFSSLHNNKDEMQFNIEDMALYIKGEKTYQIGQAIRVKLKEVRVETRSIIGELLV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaataaccccctattagcacaacttaagcaacaaatcgaagccagtaaagaa
tatgtagaaggcatagtaaaagcatctgataagagctatggctttcttgaatgtgataaa
gagaccttctttattccaccaccagaaatgaaaaaaattatgcacggagacaaaattcgt
gcttccgtaaaacgtgatggagataaagctcaggtcgaagttgattcgttaattgaacct
atgctaaatcgctttattgctcaggtgagattcaataaagaggggaaattacagctttca
gttgatcatcccaatattaaattatcaattcctgctaataccaataaaaaagtgactgaa
aaattagcggagaatgattgggttgttgcacaattaaaaaatcatccattaagggatgat
cgctttttctttgctcaagttacgcaatttatttgtcaagctaatgataattttgcacct
tggtgggtaacccttgctaaacatgagcaaccgagagaagccgtaaaaggcgaggcggaa
tatcatttacacgacgagttagagcgtgaagatttaaccaatttatattttacgacgatt
gactcaccaagcacacaagatatggatgatgcactctatattgaaccaattaaacaaggc
gaagaacaatcaggctggtgtttagtggtggcgattgctgatccaactgcttatatccca
gaaaattcaaatattgaaaaagccgctcgtcaacgttgtttcactaactatttacccggt
ttcaatattccaatgttaccgagagaattatcagatgagctttgctcgttagtgccgaac
gaaaaacgtcctgcattagtggcgtatattgaagtcgatatgtcgggcgaagtgatttct
gaaccgcaatttacgtcggcgtgggtagagtctaaggctaaattggcttataacgatgtt
tctgatttcattgaaggtaacgaaaatcattgggtacctgaaaatgaggaaaccaagcaa
caaattgaatggttacaccaattcactcaagctcgcatggactggcgtgctaaaaatgct
gttattttcaaagagcaaggcgactattcttttgaattaaatgaagatggttcggtgcgt
gatatccatgttgaatttcgtcgtattgcaaatcaaatgattgaagagtctatgatcctt
gcgaacatttgtgctgcacaatatttagataaatatgcacatacgggtatttttaatacc
cattcaggctttgatcctaaaaatttagaggcagttaaaaatttcttattggatacctta
tcgactgatgaaaatcgcgatgaattagccgaacgttattcagtggaacgtttagcaacc
ttggaaggttattgtgaaatgcgtcgtgatatcgctgacttcccagaaaacttcctcgat
atgcgtttacgtcgctatctcacttttgctgagtttaaggcacagtcggcaccgcattta
ggcttggggattgaacattatgcgacttggacttctccaattcgtaaatatggcgatatg
gtgaaccatcgtttaatcaaacaagtgttagctcataaagcgacaagtgcagttgaagag
agtattttggctcgtttacaagaagcgcgtaagcaaaatcgtatggttgagcgtgatatt
gctgattggctgtatgctctttatcttgctccaatggtggaaaaaaatattgaatttgat
tgcgaaattcaagacgtttcacgtggtgggctacgagtgaaagcgatagaaaatggtgcc
tcaatatttatcccattctcttctttacataacaataaagatgaaatgcaatttaatatt
gaagatatggcgctatatatcaaaggcgagaaaacctatcaaattggacaagcaattcga
gttaaattgaaagaggttagagtcgaaactcgttcaattattggcgaattattagtgtaa
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