Otariodibacter oris: A6A10_03995
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Entry
A6A10_03995 CDS
T06287
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ooi
Otariodibacter oris
Pathway
ooi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ooi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6A10_03995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ooi03019
]
A6A10_03995
Enzymes [BR:
ooi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6A10_03995
Messenger RNA biogenesis [BR:
ooi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6A10_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QGM80621
LinkDB
All DBs
Position
complement(878628..879866)
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AA seq
412 aa
AA seq
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MSKHLTEQRFIDFPIQESVLDALDSKSFEFCTPIQAKTLPYTLAGQDIAGQAQTGTGKTL
AFLVATFNHLLSHPIETKSNQPKALILAPTRELAVQIAADAEMFTQRTGLNLALAYGGDG
YEKQLHAIEKGVDILIGTTGRVIDYVKQNIINLDQIQVVVLDEADRMFDLGFIKDIRYLM
RKCPKPESRLTMLFSATLSHRVRELAFEDMHNAEYVEIEPLQRTGHRIKEELFYPSNEDK
MPLLLTLIEEEWPDRCIIFANTKHKCEDIWRYLSSDGHRVGLLTGDVPQKKRLTLLDEFT
QGNLDILVATDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGSSISFACEQ
YAVNLPAIEEYIGHPIPVSQYNSEALLALPKLRRSKTRSTRFNTKRTRNRKA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacatcttacagaacaacgatttattgattttcctattcaagaaagtgtctta
gatgctttagatagtaaaagttttgaattttgcacccctattcaagcaaaaactctacct
tatacattggcaggtcaagatatcgcaggacaagcacagacaggaacgggaaaaacatta
gcgtttctagttgctacatttaatcacctattgagtcatcctatcgagacaaaatcaaat
caacctaaagcattgatattagctcctacacgagaattagcggtgcaaattgcagcagat
gcagaaatgtttacccaacgtactgggctaaatttagctctagcctatggcggagatggc
tacgaaaaacaattacatgcaattgaaaaaggtgttgatattctaatcggtacaacaggg
cgagtgattgattatgtgaagcaaaacatcatcaatttagatcaaattcaagttgttgta
cttgatgaagcggatagaatgtttgatttaggctttatcaaagatattcgctatttaatg
cgtaaatgcccaaaacctgaatctcgcttaactatgcttttctcagcaacgctttcccat
cgagtaagagaattagcctttgaagatatgcataatgcggagtatgttgaaattgagcca
ttacaacgtacaggtcatcgcattaaagaagagctattctacccatctaatgaagataaa
atgccattattactcacattaattgaggaagaatggcctgatcgctgtattatcttcgcc
aatacaaaacataagtgtgaagatatttggcgttacttgagttcagatggacatcgtgtc
ggattattgacgggcgatgttcctcagaaaaaacgtctaacactattagatgaatttaca
cagggtaatcttgatattttagtggcgacagacgttgcagcgcgtggtttacatatccct
gatgtcacccatgtctttaattacgatcttcctgatgatcgtgaagattatgtacatcgt
attgggagaactggtcgagcgggagaaagtggttcatcaattagttttgcttgtgaacaa
tacgcagttaatttacctgcaattgaagaatatattggacatccaatccctgttagccag
tataatagcgaagcgttgttagcattacctaaactacgtcgttcaaaaactcgctcaacg
cgttttaatactaaaagaacaaggaacagaaaagcataa
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