Otariodibacter oris: A6A10_04945
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Entry
A6A10_04945 CDS
T06287
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ooi
Otariodibacter oris
Brite
KEGG Orthology (KO) [BR:
ooi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ooi03016
]
A6A10_04945
Enzymes [BR:
ooi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6A10_04945
Transfer RNA biogenesis [BR:
ooi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6A10_04945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
FANCL_d2
Motif
Other DBs
NCBI-ProteinID:
QGM80795
LinkDB
All DBs
Position
1070869..1071999
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AA seq
376 aa
AA seq
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MDNKINFVWVDSDESLHNAYQSIQKHKVIALDTEFVRIRSYYPKLGLLQLFDGEQVYLID
PSHLSHFQPIIDLLKNTNIIKVLHASGEDLDIFYHYFKQMPQPMLDTQIMSAFLGLGSSI
GFSKLVENYCHIQLDKSVSRTDWLARPLSEKQLQYAAADVWFLLPIYQKIMEQLKETEWQ
EAVNEECDKLKIKRQKEILPEKAYKRIGNAWQLEPQQLAILQVLEKWRVEEAKKRDLALN
FIVKEASLWKIAKDQPKHTAQLLEFMHPNEVRIYGKKLLLIVEQAKQIPEEDYPARVSRL
MDVPNYKKDMQFLKKSAATIKPESLPIEVFCSKRQLEQLFKWHNVYKTNHTMPELLSGWR
KRFGDELYKRYLAYLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggataataaaattaattttgtatgggtagattctgatgaaagtttacacaatgcatat
caaagtatccaaaagcataaagtgattgcattagatacagagtttgtccgcattcgttct
tattatcccaaactgggactattacagttatttgatggtgaacaagtttatcttattgat
ccctctcatctttctcatttccaacccatcattgatttattaaaaaatacaaacattatc
aaagtattgcatgcaagtggtgaggatttggatattttttaccattatttcaaacaaatg
cctcaaccaatgcttgatacacaaattatgagtgcatttttaggattgggatcatcgatt
ggattttctaagctcgtagaaaattattgtcatattcaattagataagtccgtatcaaga
acagactggctagctagaccattgagtgaaaaacagctccagtatgctgcagcggatgta
tggttcttgttgcctatttatcaaaaaataatggaacaattaaaagaaacagagtggcaa
gaagctgttaatgaagaatgtgacaagttaaaaattaaacgtcaaaaagaaatcttacca
gaaaaagcatataaacgtattggcaatgcttggcaattagaacctcagcaattagctatt
ttgcaagtattagaaaaatggcgtgttgaagaagccaaaaaacgtgatttagcgttaaat
ttcatcgtaaaagaagcatctttatggaaaattgcaaaagatcagcctaaacataccgct
caattactcgaatttatgcacccaaacgaagtaagaatttatggtaaaaaattattactg
attgttgaacaagctaaacaaattcctgaagaagattatccggccagagtcagtcgatta
atggatgtgcctaattataaaaaagatatgcaattcttaaagaaaagcgcagcaacgatt
aaacctgaaagtttaccgatagaagtattttgcagtaagcgacaattagaacaattattc
aaatggcataacgtttataaaacaaatcatacgatgccagaattattatccggatggcga
aagcggtttggtgatgagctatataaacggtatttagcgtatttaggataa
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