Otariodibacter oris: A6A10_08350
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Entry
A6A10_08350 CDS
T06287
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ooi
Otariodibacter oris
Pathway
ooi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ooi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6A10_08350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ooi03400
]
A6A10_08350
Enzymes [BR:
ooi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A6A10_08350
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A6A10_08350
DNA repair and recombination proteins [BR:
ooi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A6A10_08350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF7129
DUF7695
Motif
Other DBs
NCBI-ProteinID:
QGM81412
LinkDB
All DBs
Position
complement(1800284..1801108)
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AA seq
274 aa
AA seq
DB search
MPELPEVETSVRGVSPYLVGQTIKQIIIRQKQLRWLVSDQLSAMDGANILNIYRRAKYLI
IHTDKGDILIHLGMSGSLGILNTETEKEIGKHDHVDLVTTNGTILRYNDPRKFGAWLWAN
KAEEAELLKKLGLEPLSDEFNADYLYKQSRNKTVAIKNFIMNNAVVVGVGNIYACESLFM
AGLHPDMATQNLKPKQAERLVKVIKDVLTKAIIQGGTTLKDFIQPDGKPGYFAQVLKVYG
RKGQECYDCGSIIESKVIGQRNSFYCPKCQKLPR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgaaaccagtgttcgcggtgtttcaccctatttagttggg
cagactattaagcaaattattatccgacaaaaacagttacgttggcttgtgagtgatcaa
ctatcagcaatggatggcgcaaatattctcaatatttatcgtcgtgctaagtatcttatt
attcacacagataaaggcgatattctcattcacttaggtatgtctggttcattaggtata
ttaaataccgaaactgaaaaagaaatcggtaaacacgatcatgtggatttagtgaccaca
aatggcacgattttacgttataacgatccgcgtaaatttggtgcgtggttatgggcgaat
aaagcggaagaggctgagttgctcaagaaactaggactagaaccactttctgatgagttt
aatgcggattacctctataaacaaagtcgcaataaaaccgtcgccataaaaaatttcatt
atgaataatgccgtagtggttggggttgggaatatttatgcgtgtgaatcgctctttatg
gcgggacttcatcccgatatggcgacacaaaatctgaaaccgaagcaagcagaacgatta
gtcaaagtgattaaagatgtactgacgaaagcaattatacagggtggaacgaccttaaaa
gattttatccaaccagacggaaaacccggttattttgctcaagtactaaaagtttatggt
agaaaagggcaggagtgctacgattgtggctcaatcatcgaatccaaagtaatcgggcaa
agaaacagtttttattgccctaaatgtcagaaattaccgcgataa
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