Oceanobacillus oncorhynchi: NP440_00160
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Entry
NP440_00160 CDS
T08799
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03030
DNA replication
oon03430
Mismatch repair
oon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP440_00160 (dnaX)
03430 Mismatch repair
NP440_00160 (dnaX)
03440 Homologous recombination
NP440_00160 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oon03032
]
NP440_00160 (dnaX)
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_00160 (dnaX)
Enzymes [BR:
oon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP440_00160 (dnaX)
DNA replication proteins [BR:
oon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NP440_00160 (dnaX)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NP440_00160 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
DnaX_C
AAA_22
AAA_19
TIP49
AAA_5
AAA_assoc_2
AAA_16
PIF1
AAA_2
AAA_7
Mg_chelatase
RCF1-5-like_lid
AAA_14
Hydant_A_N
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
UUI40068
LinkDB
All DBs
Position
34212..35921
Genome browser
AA seq
569 aa
AA seq
DB search
MSYQALYRVWRPRTFEDVVGQQHITRTLQNAITQDKFSHAYLFSGPRGTGKTSAAKIFAQ
TINCEHAPVKEPCNECAACKGIQDGSISDVIEIDAASNTSVDDIRDIRDKVKYAPSAVPY
KVYIIDEVHMISVNAFNALLKTLEEPPKHVVFILATTEPHKIPLTIISRCQRFDFKPISN
QAIVERMQKIMQAETISVTEEALESVALAAEGGMRDALSILDQAISYSEEQVELEDVLAV
TGGVSQEVLTNIVRAMIQQDVQTVLQGLDQMIQTGKDPGKFVQDLIYFMRDLLLYKSSSG
LADLLERAVANEAFEALSEQVENSWIQHAIIELNQCQQEMKWSNSPKIFIEVALLSITDQ
FGKTQGSGQLQPEAVEQSAVVGQLQQKLQAMERDIAKLKEAPPQQQDAGGTAPAQERRRP
SSRNSRNTYKIPFDRIRDTLGKAEKKELKDVHAHWANFLNQLKTTNAPAHATIQDSKPAA
ASADTLIVAFKYEIHCSLFLDHREMVESILGNLDKHRTIIPIPEKEWNDLRSEYIQKQEK
PDEPKKPEGDPLVDEARKLFGDDLLEIYD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagctttataccgcgtctggcgaccaagaacatttgaagatgtcgtagga
cagcagcatatcacgagaacattacaaaatgctattacccaggataaattctcacatgct
tatttattctctggcccaagagggacagggaaaacgagtgctgcaaagatttttgcacaa
acgattaattgtgagcatgcgcctgtcaaagaaccatgtaatgaatgtgcggcatgtaaa
gggattcaagatggctctatttcggatgtcattgaaattgatgcggcatcaaatactagc
gtcgatgatattcgtgatattcgtgataaagtaaagtatgcaccgagtgctgttccttat
aaagtgtatattattgatgaagtgcatatgatatctgtcaatgcatttaatgcgcttttg
aaaacgctggaagagccgccaaaacatgttgtatttattctggcaactaccgaaccgcat
aaaataccattaacgattatatcccgttgccagcgctttgatttcaaaccgatttctaat
caggcaattgtggaaagaatgcaaaaaatcatgcaggcagaaactatttctgttacagag
gaagccttagagtctgtggcattagcagcagaaggcggaatgcgtgatgcactgagtatc
ctggaccaggcaatttcctatagtgaggagcaggtagagttagaagatgtgcttgctgta
actggcggagtatctcaggaggtgctcaccaatatcgtccgtgcaatgattcagcaggat
gtgcagacggtgcttcaaggattggaccagatgattcagaccggaaaagatcccggaaag
tttgtacaggatttaatctactttatgcgtgatttacttttatataaaagctcgtcaggt
ttagctgatttattagaacgggcagtagccaatgaagcttttgaagcattatcggagcaa
gtggagaacagctggattcagcatgcaattattgaactgaatcaatgccagcaggaaatg
aaatggtccaacagtccgaaaatctttattgaagttgcactgttgtccattacagatcaa
tttggaaagacgcaaggatccggacagcttcagccggaagctgtggagcaatcagctgtt
gtcgggcagcttcagcagaaactgcaggcgatggagcgtgatattgcaaaattaaaagaa
gccccgccccagcagcaagatgctggcggtaccgcccctgcacaggaaagacgccgtccc
agctcgagaaattcacgaaacacttataagattccatttgatcgaattcgtgatacacta
ggaaaggcagagaaaaaagaactgaaagatgttcatgcacattgggcaaacttcttaaat
cagttgaaaacaacaaatgccccggctcatgcgacgattcaggacagcaagcctgctgcg
gcatcagctgataccctgattgttgcgtttaaatatgaaattcattgttctttattcctg
gatcatcgggaaatggtagaatcgatattagggaatttggataaacaccgcacgattatt
cctattccggagaaagagtggaatgacctgcgcagtgagtatattcaaaagcaggaaaag
ccggatgaacccaagaaaccagaaggagacccgctcgtagatgaagcgcgaaagcttttt
ggtgatgatcttttagaaatttatgattaa
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