Oceanobacillus oncorhynchi: NP440_00540
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Entry
NP440_00540 CDS
T08799
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_00540 (radA)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NP440_00540 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA
NTPase_1
AAA_16
Rad51
AAA_5
nSTAND3
AAA_24
NACHT
SLFN-g3_helicase
KTI12
ATPase_2
AAA_18
AAA_14
AAA_30
GvpD_P-loop
MCM
ABC_tran
HypA
KdpD
NPHP3_N
TIP49
DAP3
Isochorismatase
DZR
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
UUI40125
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Position
104208..105581
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AA seq
457 aa
AA seq
DB search
MAKRKTKFVCQECGYESAKWMGKCPACHQWNTMVEEIEAASVKGRTGYTSGAASSQKPEK
ITSIESKKEPRITTKMREFNRVLGGGVVLGSLVLIGGDPGIGKSTLLLQISAQLAEKALP
VLYVSGEESTRQTKLRADRLDIKTDELYVLSETNLMDISRQIEEINPSFVVVDSIQTIFK
EEITSAPGSVSQVRECTMELMKIAKTKGIPVFIVGHVTKEGSIAGPRLLEHMVDAVLYFE
GERHHTYRILRGVKNRFGSTNEMGIFEMKEEGLREVMNPSEIFLEERSQGAAGSTVVASM
EGTRPVLVEIQALISPTSFGNPRRTATGVDHNRVPLLMAVLEKRVGLMLQNQDAYIKVAG
GVKLDEPAIDLALAVSIASSFRDHPTKPEDIFIGEVGLTGEIRRVSRIEQRVQEAAKLGF
KRVICPKNNLDGWNYPAGIEVIGVSNVQEALEIGLHQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaggaaaacaaaatttgtctgtcaggaatgtggatatgaatcggctaagtgg
atggggaaatgtccagcttgccatcaatggaatacgatggttgaagaaattgaagctgct
tctgtaaaaggcaggacaggatacacgtctggtgcagcctcctcacaaaaacccgaaaag
attacctccatcgaatcaaagaaggaaccccgcattacgacgaagatgcgggaatttaac
cgtgtattaggcgggggagtggtattagggtcactggttttaattggcggagatccgggt
attggaaaatcaacactcctgttgcaaatatctgcacagctggcagagaaggctttaccg
gttctctacgtatctggtgaagaatccacaaggcaaaccaaattgcgtgcagatcgttta
gatataaaaacggatgaactatatgtattatcagaaacgaatttaatggatatcagcagg
cagatagaagaaatcaatccttcctttgtcgtcgtcgattccattcaaaccatttttaaa
gaagagataaccagcgcgccggggagcgtgtcacaggtcagagaatgtacaatggagctt
atgaaaattgcgaagaccaaaggcattcctgtttttattgtcgggcacgtgaccaaagaa
ggttcgattgcgggtccgcgtttactggagcatatggtggatgcggtattgtattttgaa
ggagaacgtcatcacacctatcgtattttaagaggtgtaaaaaatcgctttggaagtacg
aatgaaatggggatttttgagatgaaggaggaaggattacgtgaagtaatgaatccgtct
gaaatctttttagaagagagatcccaaggagctgccggctcgaccgttgtagcatcaatg
gaaggtacacgccctgttttagtagagattcaagcgctgatttctccaacaagcttcggg
aacccgcgcagaacagccacgggagtagaccataatcgcgtgccgcttttaatggctgtg
ctggaaaaacgcgttggactgatgctgcaaaaccaggatgcttatatcaaagtagcgggc
ggggtcaagctggatgaaccggcgattgacttagcgctggcggtcagtattgcatcgagt
ttccgcgatcacccaaccaaaccagaggatatttttatcggtgaggttgggttaacagga
gaaattcgcagagtatcccgaatcgaacaacgggtgcaggaggctgcgaaactggggttt
aaacgggtaatctgcccgaaaaataatttagacggctggaattatccggctggtatcgaa
gtaattggtgtttccaatgtacaggaagctttagaaatcggattacatcaatag
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