Oceanobacillus oncorhynchi: NP440_05715
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Entry
NP440_05715 CDS
T08799
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oon03021
]
NP440_05715 (sigB)
Transcription machinery [BR:
oon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NP440_05715 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
GerE
HTH_23
HTH_Crp_2
IF2_N
NirdL-like_HTH
HTH_28
HTH_37
HNF-1_N
DUF134
Sigma70_ECF
Endotoxin_N
Motif
Other DBs
NCBI-ProteinID:
UUI41083
LinkDB
All DBs
Position
1147291..1148082
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AA seq
263 aa
AA seq
DB search
MTTKSQPFNRGGDEVYQWISTLQEDPTNEELQEKIVLTYQNLVGSIARKYSKNSAIHEDL
VQVGMIGLLGAIKRYDPSYGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIR
KSADELTTKNQKSPTIQEIAEHIGVPEEEVLETMEMSKSYKALSVDHKIEADSDGSTVAI
LDLIGNEDNSLKNLEQKMILEKVLPVLSEREQLILECTYFKNMSQKETGEMLGISQMHVS
RLQRRALRKLRETMQTESTEVFD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatctcaaccattcaatagagggggagatgaggtttaccaatggataagt
acacttcaggaagatccaacaaatgaagaattacaggaaaagattgttttaacttatcag
aatctcgttggatctattgccaggaagtactccaaaaatagcgctattcatgaagacctt
gtacaagtcggcatgattggattgcttggggcaattaagaggtacgatccgtcatatggt
aagtcgtttgagtctttcgctatcccaaccattattggtgaaataaagcgatttatacga
gataagacatggagtgtccatgtgcctcgtcgtattaaagaattgggaccaaaaatccgc
aaaagtgctgatgaactaacgactaaaaatcaaaaatctcctaccatacaagaaattgca
gaacacattggtgtaccggaagaagaagttttagaaacaatggaaatgagtaaaagctat
aaagctttatcagttgaccataaaattgaagctgattcagacggcagcactgttgctata
ttggacttaattggtaacgaagacaatagtcttaaaaacttggagcaaaaaatgattctt
gaaaaagttcttcctgttttatcagaacgggagcagcttattttagaatgcacctatttt
aaaaacatgagccagaaagaaacaggtgaaatgctgggtatttctcaaatgcatgtgtca
cggcttcaaagacgagcactccgtaaattgcgagaaacaatgcaaacagaaagtacggag
gtattcgattga
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