Oceanobacillus oncorhynchi: NP440_06090
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Entry
NP440_06090 CDS
T08799
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP440_06090 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oon03019
]
NP440_06090 (groL)
03110 Chaperones and folding catalysts [BR:
oon03110
]
NP440_06090 (groL)
03029 Mitochondrial biogenesis [BR:
oon03029
]
NP440_06090 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oon04147
]
NP440_06090 (groL)
Enzymes [BR:
oon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NP440_06090 (groL)
Messenger RNA biogenesis [BR:
oon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NP440_06090 (groL)
Chaperones and folding catalysts [BR:
oon03110
]
Heat shock proteins
HSP60 / Chaperonin
NP440_06090 (groL)
Mitochondrial biogenesis [BR:
oon03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NP440_06090 (groL)
Exosome [BR:
oon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NP440_06090 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NP440_06090 (groL)
Exosomal proteins of breast cancer cells
NP440_06090 (groL)
Exosomal proteins of colorectal cancer cells
NP440_06090 (groL)
Exosomal proteins of bladder cancer cells
NP440_06090 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UUI41134
LinkDB
All DBs
Position
1213288..1214919
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFSEDARRAMLRGVDTLADAVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIE
LEDAFENMGAQLVSEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTSGANPVGIRRGIE
KAVALAVEELKGISQPIESKEAISQIAAVSSGDGEVGQLIAEAMERVGNDGVITIEESKG
FNTELEVVEGMQFDRGYSSPYMVTDQDKMEAVLEDPYILITDKKIGNIQEVLPVLEQVVQ
QGKPLLMIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAVLTGAEVIT
EDLGLDLKSTSIEQLGRASKVVVTKDDTTIVEGSGDPETISSRVAQIRAQAEETTSDFDK
EKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNSTRAGVEEGMVPGGGTALVNI
HGKVSELSLEGDEATGASIVLRALEEPVRQIVHNAGLEGSIIVERLKGEKVGIGYNAATD
EWVNMVEAGIVDPTKVTRYALQNAASVAAMFLTTEAVVADKPDENEGGGMPDMGGMGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagacattaaatttagtgaagacgcacgacgcgcaatgctgcgtggtgtcgat
accttagcagatgcagtaaaagtaaccttaggaccaaaaggccgcaacgtggttctagat
aaaaaattcggttccccgctgattacgaatgatggcgtaaccattgcaaaagaaatcgaa
ttagaagatgcatttgaaaacatgggtgcacagcttgtatccgaagtagcatctaaaaca
aacgatgttgccggtgacggtacaacaacagcaactgtacttgctcaagcaatgattcgt
gaaggacttaaaaacgtaacttccggcgcaaatccagttggaatccgccgcggtattgaa
aaagcagtagcattggctgtagaggaattaaaaggcatttctcagccaatcgaaagcaaa
gaagcaatttcccaaattgcagctgtttcttcaggcgacggcgaagtaggtcaattgatt
gcagaagcaatggaacgtgtaggcaatgacggtgttatcaccattgaagaatcaaaaggc
ttcaacacagagcttgaagtagtagaagggatgcaattcgatcgcggatactcttctcct
tatatggttactgaccaagataaaatggaagctgtactagaagatccatatatcttgatt
acagataagaaaattggaaatatccaggaagtactgccagtgttagaacaagttgttcaa
caaggcaaaccgcttcttatgattgcagaagatgttgaaggcgaagcacttgctacctta
gtagtaaacaaattacgcggtacattcaacgcggtagctgtgaaagctccaggattcggt
gaccgccgtaaagcaatgcttgaggatatcgctgtactgactggtgcagaagtaattaca
gaagaccttggactggatcttaaatcaacaagcattgagcaattaggacgtgcttctaaa
gttgtcgtaaccaaagatgatacaacaatcgtagaaggctcaggagacccagaaacaatc
tccagccgtgtggcacaaatccgtgcacaagcagaagaaacaacttctgatttcgataaa
gaaaaattacaagagcgcctggcaaaattagctggcggtgttgctgtcgttaaagttggt
gcagctacagaaacagaattgaaagaacgtaaacttcgcattgaggatgcactgaactct
acgcgtgcaggtgtagaagaaggaatggttcctggtggcggtactgcccttgtgaacatc
cacggaaaagtaagcgaacttagcttagaaggcgacgaagcaactggtgcgagtatcgta
cttcgtgcactagaagagccggttcgtcaaatcgttcataatgctggactggaaggttct
atcattgtagagcgtctaaaaggcgaaaaagtaggcatcggctacaatgcagcaacagac
gaatgggtaaacatggttgaggctggaatcgtagacccaacgaaagtaactcgttacgcg
cttcaaaacgcagcatctgttgcagcaatgttcttaactacagaagctgtcgtagcagat
aagccggatgaaaatgaaggcggcggaatgcctgatatgggcggcatgggcggtatgcct
gggatgatgtaa
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