Oceanobacillus oncorhynchi: NP440_06435
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Entry
NP440_06435 CDS
T08799
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NP440_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_06435
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NP440_06435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1249
Zn_ribbon_3
Inhibitor_I9
Motif
Other DBs
NCBI-ProteinID:
UUI41198
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All DBs
Position
complement(1262820..1263698)
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AA seq
292 aa
AA seq
DB search
MHTMWKGTINFGLVNIPVKMHAATENKDIKLRQLHKKCKTPIKYEKTCPNCGDEEVKSED
IVKAYEYASNKFVVLDDEELEALKKEQEDKAVEIVDFVQLEEIDPIYFEKSYYLSPNEGG
SKAYALLREALTDTGKIGIAKMMIRSKEQLAVIRVYKDAIVVETIHYPDEVRDVGEVPNV
PSQESVGKKELDTAKMLIEQLTTEFEPEKYKDDYRTALMELIEAKKNNKEIEIGGETKTK
PDNVVNLMDALQESLDKAKSEKPKTTKPKKKTAAKKKTTTTKTSAKKKKATS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgatgtggaaaggaaccatcaactttggtctggttaatattcctgtaaagatg
cacgcggctaccgaaaataaagatattaaactgcggcagctgcataagaaatgcaaaaca
ccaattaaatatgaaaaaacctgtcctaactgcggtgatgaagaagttaaaagcgaggat
attgttaaggcttatgaatatgcaagtaacaagtttgtggttttggatgatgaagaactg
gaagcattgaagaaagagcaagaagataaggctgttgaaattgttgattttgtccagttg
gaagaaatagaccccatctattttgaaaaaagttattatctatcccctaatgagggcgga
tcgaaagcatatgcgctattgagagaggctttaacagatacaggaaagattggcatagct
aaaatgatgatacgttctaaagaacagcttgctgtaatcagagtgtataaagatgctatc
gtagttgaaacaatacactatcctgatgaggttcgggacgtaggagaagtgcctaatgtt
ccgagccaagaatctgttggcaaaaaagaattagatactgctaagatgttaattgagcaa
ctcactactgaatttgaacccgaaaaatataaggatgattatcgtacagccttaatggaa
ttgattgaagctaagaaaaataataaagaaatcgaaatcggtggagagacaaaaacaaaa
ccggataacgtggtcaacttaatggatgcgttgcaggaatcgttagataaggctaaaagc
gaaaaaccaaaaacaacaaaaccgaaaaagaaaacagctgccaagaagaaaacaactact
accaagacttctgctaaaaagaaaaaagctacttcttaa
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