Oceanobacillus oncorhynchi: NP440_10615
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Entry
NP440_10615 CDS
T08799
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03030
DNA replication
oon03430
Mismatch repair
oon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP440_10615
03430 Mismatch repair
NP440_10615
03440 Homologous recombination
NP440_10615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oon03032
]
NP440_10615
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_10615
Enzymes [BR:
oon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP440_10615
DNA replication proteins [BR:
oon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NP440_10615
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NP440_10615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UUI41941
LinkDB
All DBs
Position
2126833..2127447
Genome browser
AA seq
204 aa
AA seq
DB search
MKFAAIDFETANEKRNSACSIGVVRFDEQEILDEYYSLINPMSDFRSMNIRIHGIREDDV
QDAPTFEDLWPALYEKLEGHIIVAHNASFDMSVLRQSLLKYDLRHPDFTSLCTVKISQRV
WPHLENHRLHTVADYHDIPLIHHHALEDAKASAFILMKALEAQQDGNAEHFLERWLASKA
SKRRSYPKTGSKNKTGRGSTKLYL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgcagcaattgattttgaaacagccaatgaaaaaagaaacagtgcctgttca
ataggtgtggtccgttttgatgagcaggagattttggacgagtattactccctgatcaac
ccgatgagtgattttcgcagtatgaatatccggattcacggtatcagagaggatgacgtg
caggatgcgcctactttcgaagacctgtggcctgccttgtatgaaaaactggaagggcat
attatagtagcgcataatgccagttttgacatgagtgtgctgcgtcaatcgctattaaaa
tatgatttaagacatcctgactttacttccttatgcactgtgaaaatatcccagcgtgta
tggccacatttagaaaatcaccgcttgcatacagtagctgattatcatgatattccatta
attcatcaccacgctttagaagatgcaaaggcttctgcgtttattttgatgaaggctctg
gaagcacagcaggatgggaatgcggaacactttttagaaagatggctggcgtcaaaagct
agcaaacgccgaagctatcccaaaacaggctctaaaaataagacagggcggggatcaacg
aagctgtatttataa
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