Oceanobacillus oncorhynchi: NP440_12600
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Entry
NP440_12600 CDS
T08799
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NP440_12600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_12600
Enzymes [BR:
oon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NP440_12600
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP440_12600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
HHH_5
UvrD-helicase
UvrD_C
AAA_14
AAA
AAA_22
NPHP3_N
AAA_7
nSTAND3
AAA_28
RsgA_GTPase
NTPase_1
DUF4926
TsaE
AAA_16
CbiA
T2SSE
DnaB_C
AAA_29
AAA_5
SLFN-g3_helicase
YajR_YAM
Zeta_toxin
NACHT
ICL
Motif
Other DBs
NCBI-ProteinID:
UUI38191
LinkDB
All DBs
Position
complement(2529032..2531368)
Genome browser
AA seq
778 aa
AA seq
DB search
MGNQIETKEALPFVTGSVINTIFRNEAEHFSIVRIKITKTNLDYQDKEIIVKGYFDQLQD
QTAYCFYGVMEKHPRYGSQLKVQSYETILPTTKDGLVQYLSSDLFYGVGKKSALKIVEKL
GENAVSKIMDDPSVLDGVSGVSKETGKKLAERLRENQGFERVAVKLSEYGIGLKMAQVIY
QTYRDEALEVLKKDPYQYVFDIEGFGFKMADQIASGQGISHTHESRIGAGVIYILQQSIQ
AGHVYLPFEKCMQEVIYLLHLPNPDQGSVSDVIMQLNTEKKVIVIDERVYLPSLYYAEDN
FTASLKKILTKPIEDEVPLAELLKITGEIEEEESLSYGKEQFDAIVQAIHSKIMILTGGP
GTGKTTVITGIIQAFAQIHELSLNLSDYQKKDNFPFILTAPTGRAAKRMSESTGLPAVTI
HRLLGWNGMGSFEKDEHEPLSGKLLIVDEFSMVDTWLANHLFKAIPDTMQIILVGDEDQL
PSVGPGQVLTDLMKSEVLPVISLTDVYRQKEGSKIIQLAHQIKNTDCDKNSLENARDFSF
ISCHDYQMTDVLTSIIDKAQKKGIDSSSIQVLSPMYRSQAGIHAINEALQQLINPPGEKK
REIAFQDVVYRVGDRVIQLINQPEDGIYNGDIGEIVAMFKPEENAENEEQIVIAFEDKEV
VFIRKDYNNFTHAFCISIHKSQGSEFPIVILPVVYSHHRMLRKNLLYTAITRGKESLIIC
GEKEAFIKGVQTEDTNRRYTSLQEMLHIQLANQKAEKKEYETVEDIPEEELSPYDFMD
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccagatagaaacaaaggaagcactgccttttgtaacagggagcgtcatcaat
acaatttttcgcaatgaggcagaacatttctctatcgtccgaattaaaataacaaaaaca
aaccttgattatcaagataaagaaatcattgtaaaggggtattttgatcagcttcaggat
cagactgcctattgtttttatggagtgatggagaagcatccccgctatggttcacaatta
aaagtacaatcctatgagaccattctgccgaccacaaaggatgggcttgtccaatattta
tccagtgatttattttacggtgtcggaaaaaagagtgccttaaaaattgtagagaagctt
ggagagaatgctgtgtctaaaattatggatgatccctctgttttagacggcgtttccggc
gtatccaaggaaacaggaaaaaagctggctgagcgtctccgggaaaatcaaggatttgaa
cgggttgctgttaaattatcagagtacggaattggtctgaaaatggctcaggtcatttat
cagacttatcgagatgaagcattagaggttctgaaaaaagatccgtatcaatatgttttt
gatattgaaggcttcgggttcaaaatggcagatcaaatagcttccggacaagggatttca
catacacatgaaagccgtattggtgcaggtgtcatttatattctacagcaaagcattcag
gcaggtcatgtgtatcttccgtttgaaaaatgtatgcaggaggttatttatttacttcat
ctgcctaatccagaccaaggctctgtttctgatgtaattatgcagttaaatacagagaaa
aaagttattgtcattgatgaacgtgtttacctgccctcgttatattatgcagaggataac
tttactgccagcttgaaaaaaattcttaccaaaccgatagaggatgaagtgcctttggcg
gagcttttgaagataacgggtgagattgaggaagaagagtcattgagctatggaaaagaa
caatttgatgccattgttcaggcaatccactcaaaaattatgattttaacaggcggaccg
ggaacggggaaaacaacggtaatcaccggaattattcaagcatttgcccaaatccacgag
ctttctttaaatctatcggattatcaaaagaaagataattttccgtttatattaacagct
cctaccgggcgggcagcaaaacggatgtctgagtcaactggcttgccggctgtgaccatc
catcgattacttggctggaacggtatgggcagctttgaaaaagatgagcatgaaccatta
tccggaaagctgctgattgttgatgaattttccatggttgatacctggttagccaatcac
ttatttaaagctattcccgatacaatgcagattattctggttggtgatgaagaccagctt
ccatcggtggggccgggtcaggttttaactgatttgatgaaaagtgaggtattgccggtt
atttcattaacggatgtatatcgtcaaaaagagggctctaaaattattcagcttgcccac
caaattaaaaacaccgattgtgataaaaattcgttggagaatgcgcgtgatttcagtttt
atttcctgtcatgattatcagatgacagatgtgttgacatctattattgataaagcgcaa
aaaaaaggaattgattcttcttctattcaggtgctgtctcccatgtatcgttcgcaagct
ggcattcatgcaatcaatgaagcattgcagcaattgattaatcctcccggcgagaaaaaa
cgggagattgcatttcaggatgtggtttatcgtgtcggcgatcgtgtaatacagttaatc
aatcagcctgaggatggcatatacaatggggacattggagagattgtcgccatgtttaaa
ccggaagaaaatgcagagaatgaagaacagattgtaattgcatttgaagataaagaagtt
gttttcattcgaaaagattataataactttactcatgcgttttgtatttccattcataaa
tcacagggaagtgaatttccaattgtgattcttccggtggtttattcacaccaccgcatg
ttgcgaaaaaatcttttgtatacagcaattacaagaggaaaagagtcattgattatttgc
ggtgaaaaagaggcctttattaaaggtgtgcaaacggaagatacgaatcgcagatatact
tcattacaggaaatgctgcacattcaattagcgaatcaaaaagcggagaagaaggaatat
gaaacggtagaggacatcccggaggaagaactgtctccctacgattttatggattaa
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