Oceanobacillus oncorhynchi: NP440_13005
Help
Entry
NP440_13005 CDS
T08799
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon00020
Citrate cycle (TCA cycle)
oon00190
Oxidative phosphorylation
oon00650
Butanoate metabolism
oon00720
Other carbon fixation pathways
oon01100
Metabolic pathways
oon01110
Biosynthesis of secondary metabolites
oon01120
Microbial metabolism in diverse environments
oon01200
Carbon metabolism
Module
oon_M00009
Citrate cycle (TCA cycle, Krebs cycle)
oon_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
oon_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NP440_13005 (sdhA)
00650 Butanoate metabolism
NP440_13005 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NP440_13005 (sdhA)
00720 Other carbon fixation pathways
NP440_13005 (sdhA)
Enzymes [BR:
oon01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NP440_13005 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
FAD_oxidored
NAD_binding_8
DAO
FAD_binding_3
LemA
RASSF8-10_RA
Motif
Other DBs
NCBI-ProteinID:
UUI38263
LinkDB
All DBs
Position
complement(2612061..2613809)
Genome browser
AA seq
582 aa
AA seq
DB search
MSKKVAVVGGGLAGLMATIKAAEAGVNVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGDS
PDLHFDDTVYGGDFLANQPQVKAMCDAAPGIIHMFDRMGVMFNRTPEGLLDFRRFGGTQM
HRTAYAGATTGQQLLYALDEQVRRYEVEGLVTKFEGWEFLEAVIDENGVGKGIVAQDVKT
HEIRAFRSDATIFATGGPGIIFGKSTNSMINTGSAASKLYLQGAKYANGEFIQIHPTAIP
GDDKLRLMSESARGEGGRVWTYKDGEPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQKL
GINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFVGEDPRKVPMKIFPAVHYSMGGLWVD
EKQMTSIPGIFAAGECDYSQHGGNRLGANSLLSAIYGGMVAGPNAIEYIDGLEEHVEELP
DELYQSREEAEQSDFEKLMNMQGTENAYQIHKELGDWMTDNVTVVRENEKLLKTDEKIVE
LMERWENININDTTRWSNQGVMFTRQLKHMLQLARVITIGAYNRNESRGAHYKPEFPERN
DEEWLKTTVAEYNAEKNEPVFSYEDVDISLIPPRKRDYTTKH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaagttgctgtagttggcggcggtctggccggtttgatggctacgatcaaa
gccgctgaagcaggagtaaatgtagatttattttctatcgtacctgtaaaacgttctcac
tctgtatgtgcacagggcggtatcaatggagctgttaatacaaagggagaaggggattct
ccagatttgcattttgatgatacagtttacggcggagactttctcgccaatcagccgcag
gtaaaagcaatgtgtgatgctgcaccaggtattatacatatgtttgaccgtatgggagtc
atgtttaaccgtacgccggaagggctattagatttccgacgttttggcggtacgcagatg
caccgtacagcatatgcaggggcaacgacaggacaacaattattatatgcgttagatgag
caggttcgccgttatgaggtggaaggactggtcactaaatttgaaggctgggaattcctt
gaagcggttattgatgaaaacggtgtaggaaaaggaattgtggctcaagatgtgaaaaca
catgaaattagagcatttcgttcagatgcaaccatctttgcaactggaggacctggtatc
attttcgggaaatcaacaaattccatgatcaatacaggctctgcagcaagtaagctttat
ttgcaaggtgcaaaatatgcaaatggagaatttatccaaatccatccgactgctattccg
ggagatgataaactaagattaatgagtgaatcagctcgtggggaaggcggacgagtttgg
acgtataaagatggagaaccttggtacttccttgaagaaaaatatccggcatatggtaac
cttgttcctcgtgatatcgcaacacgtgaaatttttgatgtttgcgtaaaccaaaaactt
ggtatcaatggggaaaacatggtttaccttgatttatcgcataaagatccaaaagagctt
gatgtaaaactcggcggaattattgagatttatgagaaatttgtcggtgaagatcctcgt
aaagtgccgatgaaaatcttccctgcagttcattattccatgggtggattatgggttgat
gagaagcaaatgacaagcattcctggaatttttgctgcaggtgaatgtgattattcacag
catggcggaaatcgcctgggtgcgaattccctgttatccgcaatctatggcggtatggtg
gcaggtccaaatgctattgaatatattgatgggctggaggagcatgtggaagagcttccg
gatgaactctatcaatctcgtgaagaagcagaacaaagcgattttgaaaagctgatgaat
atgcagggaacagaaaatgcatatcaaatccataaagagcttggagactggatgacagat
aacgtaacagtggtacgtgaaaatgaaaagctgttaaaaacggatgagaaaatcgtcgaa
ttgatggagcgctgggaaaatatcaatattaatgatacgacccgctggagcaaccaagga
gttatgttcacccgtcaattaaagcatatgcttcaattagcacgagtgattaccattggt
gcatataaccggaacgaaagccgcggagcacattataaaccggagtttccggaaagaaat
gatgaggaatggttaaaaacaactgttgctgaatacaatgcggaaaagaatgagcctgta
tttagttatgaagatgtagatatttccttgattccccctcggaaacgagattatacaaca
aaacattag
DBGET
integrated database retrieval system
