Oceanobacillus oncorhynchi: NP440_13240
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Entry
NP440_13240 CDS
T08799
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NP440_13240 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_13240 (mutM)
Enzymes [BR:
oon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NP440_13240 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NP440_13240 (mutM)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NP440_13240 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UUI38309
LinkDB
All DBs
Position
complement(2661669..2662514)
Genome browser
AA seq
281 aa
AA seq
DB search
MPELPEVETIKETLKLLVQGKTIEKADVLWANIIKQPDDAEIFKHLLEGQTFQQIKRKGK
FLLFYLDEYVLVSHLRMEGKYRLHQPGEEIEKHTHVVFHLKNGETLRYNDVRKFGTMHLL
AKGSEFTQAPLAALGPEPFEEAFTTDYFYEKLKKSSRFIKTALLDQNLVTGLGNIYVDET
LFRSGIHPLTKCNELTKKEASVIRSAAIETLQEALKAGGTTIRSYVDSQGNMGMFQQVLY
VYGQDKKPCKTCGEEIIKMKVGGRGTHLCLHCQPQKKVNVL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtagaaaccattaaagagacgttaaaattgcttgttcaagga
aagacgattgaaaaagcagatgttctttgggcaaatataataaaacagccggatgatgcg
gagatattcaagcatctgctggaaggacaaacctttcaacaaataaaaagaaaagggaag
tttctgcttttttatctagatgaatatgtgcttgtatcccatttacgaatggaaggaaaa
tatcggttgcatcagccgggagaagagatagaaaagcatacgcatgttgtcttccattta
aagaatggagagacattgcgttataacgatgttcgtaagtttggaaccatgcatttattg
gccaaagggagtgaattcacgcaggctcctttagctgcgcttggccccgagccgtttgaa
gaagcatttacgacggattatttttacgaaaagctgaaaaaatcctcccggtttattaaa
acggcgcttttggaccaaaatctggtcacggggcttggaaatatttatgttgacgagacg
ttattccgttccgggatccacccgttaacaaaatgcaatgaactgacaaaaaaagaagcg
tctgttattcgttctgcagccattgaaactcttcaagaagctctgaaagctggtggtacg
accatccgaagctacgtagacagccaagggaatatgggaatgtttcaacaggttttatat
gtttacggtcaagataagaagccatgtaaaacctgtggggaagaaattataaaaatgaag
gttggcggacggggaacgcacctatgtcttcattgccagccgcaaaaaaaggtgaatgtt
ttatga
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