Oceanobacillus oncorhynchi: NP440_13245
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Entry
NP440_13245 CDS
T08799
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03030
DNA replication
oon03410
Base excision repair
oon03420
Nucleotide excision repair
oon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP440_13245 (polA)
03410 Base excision repair
NP440_13245 (polA)
03420 Nucleotide excision repair
NP440_13245 (polA)
03440 Homologous recombination
NP440_13245 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oon03032
]
NP440_13245 (polA)
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_13245 (polA)
Enzymes [BR:
oon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP440_13245 (polA)
DNA replication proteins [BR:
oon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NP440_13245 (polA)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NP440_13245 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP440_13245 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
HHH_2
HHH
Phage_cap_E
RNF220
Motif
Other DBs
NCBI-ProteinID:
UUI38310
LinkDB
All DBs
Position
complement(2662527..2665163)
Genome browser
AA seq
878 aa
AA seq
DB search
MTKKLILMDGNSIIYRAFFALPLLNNEKGVYTNAVYGFTTMLLRILEEEKPTHMLVAFDA
GKTTFRHQTYKEYKGGRQKTPSELSEQFPVLKELLDAFDIRHYQLDQYEADDIIGTLSKQ
ADDKDWEVTVISGDKDLLQLVSDHVTVSVTKKGISEIEKYTPSYLLEKMQVTPEQITDLK
GLMGDSSDNIPGVPGVGEKTATKLLTQFHTLEKVYENLDDVSGKKLKENLTNHQDDALMS
KDLATINRDSPIEVSLDDVIYEGYSAASVRQMFMDLGFQSLLTRLAGSDETEEEAIEHKE
IQYDIVEEITEDLFSEEDVLVIEMLGENYHTAQIEGIGIVNADKKSFIPTSVAMDSPIFK
KWAEDPQKKKIVFDAKRTKVALLRNDIQIEGIVFDALLASYLINPAENSHDIPAIASRKG
KYDVSFDEEVYGKGAKQKVPEEEILSEHVIRKTNVLLELYPAMEKELEDNEQAKLLKELE
MPLALILAEMEHQGVLVDVDRLKEMGDDLKERLSNLEKEVYELAGKEFNLNSPKQLGPVL
FEDLGLPVIKKTKTGYSTAADVLEQLADQHEIIPKLLLYRQLGKLQSTYIEGLQKVVRKD
THKIHTRFNQALTQTGRLSSVDPNLQNIPIRLEEGRKIRQAFVPSREGWKMFAADYSQIE
LRVLAHIAGDEKLIAAFKNDLDIHTQTAMDVFHVERDEVTSGMRRQAKAVNFGIVYGISD
YGLSQNLGITRKEAKQFIERYFKSYPSVKEYMDDIVVEAKQKGYVSTLMNRRRYLPDITS
RNFNVRSFAERTAMNTPIQGSAADVIKKAMIDLDHRMKQEKLQAKLLLQVHDELILEAPE
DEIEILKEIVPEMMEKTVDISVPLKVDYSYGESWFDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaagctaattctaatggatggcaacagtattatttatcgtgctttttttgct
ctgccattattgaataacgaaaaaggcgtctatacgaatgccgtttacggatttactacg
atgctgctccgtattttagaggaagagaagccaacgcatatgctcgtggccttcgatgca
gggaaaacaacatttcgccatcaaacctataaagagtataaaggaggacgccaaaaaaca
ccttcagagctttctgaacaatttccagtcttaaaagagctgctggatgcttttgacatc
aggcattaccagttagatcagtatgaagcagatgatatcattggcacattatcaaaacag
gcagatgataaagactgggaagtaaccgttatttctggcgacaaggatttactgcagctt
gtttcggatcacgtgacggtcagtgtaaccaaaaaaggaatcagtgaaattgaaaaatat
acaccgtcttatcttcttgagaaaatgcaggtaacgcctgaacagattactgatttaaaa
ggactgatgggagacagttcagacaatatcccgggagtgccgggtgtcggtgaaaaaaca
gcaacgaagctgttaacacaatttcatacgttagagaaggtttacgagaatctggacgat
gtaagcgggaaaaagcttaaagaaaatttaacaaaccaccaagatgatgcgctaatgagt
aaagatttagcaacaatcaatcgggactcgcccatcgaggttagtctggatgatgttatt
tatgaaggctactctgccgcttccgtccgtcaaatgtttatggatttaggcttccaatct
ctgttgacgcgtcttgccggctccgacgaaacggaagaagaggcgatagagcataaagag
attcaatatgacatagtggaagaaataacggaagatctattttcagaggaagatgtactc
gtaatagagatgttgggtgaaaattatcatacagctcaaatagaaggtattggcattgtc
aacgccgataaaaaaagcttcatacctacttcggttgcgatggactcgcctattttcaaa
aaatgggcagaggaccctcagaaaaagaaaattgtatttgatgctaagcggacaaaagtt
gccttattacggaacgatatacaaatagaaggcatagtgtttgatgcgctgcttgcttct
tatttaatcaatcctgctgaaaacagtcatgatatacctgctattgcaagcagaaaagga
aaatatgacgtatcctttgatgaagaggtttatggaaaaggcgcaaaacaaaaggttccg
gaagaagaaattctcagtgagcatgtgatccggaaaaccaatgtactgcttgaattatat
ccggcgatggagaaggaattagaggataatgaacaggcgaaattattaaaggaattagaa
atgccgcttgctttgattcttgctgagatggagcatcagggtgttttagtagatgtggac
cggctgaaagaaatgggagacgatttaaaagaaaggctcagcaatttagaaaaagaagta
tatgaattagctggcaaggaatttaatctgaactcaccgaagcagctcgggccagtgtta
tttgaagatttagggcttcctgtaatcaagaagacgaagactggttactctacggcagca
gatgttttggaacagctggcagatcagcacgaaataattcctaaattacttttgtaccgt
cagttagggaagctgcaatcaacctatattgaaggcttgcaaaaggtggtccgtaaagat
acgcataagattcatacacgctttaatcaggctttaacacagacaggcagattgagctca
gttgatcccaatttgcaaaatatccctatccgtctggaggaaggcagaaagatacggcag
gcgttcgtcccatctcgagaaggctggaaaatgtttgctgctgattattcgcaaatcgaa
ttacgggtacttgcccatattgcaggggatgagaaattgattgctgcctttaaaaatgat
ttagatattcatacacagacagcaatggatgtatttcatgtcgagagagacgaagtcacc
tcgggtatgcgccggcaggcaaaggctgtcaactttgggattgtatatggaatcagtgat
tatggactatcccagaacttagggattactcggaaagaagcgaaacaattcatcgaacgg
tattttaagagctatccaagcgttaaagaatatatggatgacattgttgttgaagcaaag
caaaaaggctatgtatccacactgatgaaccgtcgccgttacttgcctgatattacgagc
aggaactttaatgtacgcagttttgcggaaagaacagcgatgaatacacctattcaggga
agtgcagcggatgtaatcaaaaaagcaatgattgatttagaccatcgaatgaaacaagaa
aaactgcaggccaagcttttattacaggtccatgatgaattgatattagaagcaccggaa
gacgagattgaaatcttaaaggaaatcgttccagaaatgatggaaaaaacggttgacatt
tctgttccgctcaaggtcgattattcttatggagaaagctggtttgacgcgaagtaa
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integrated database retrieval system
