Oceanobacillus oncorhynchi: NP440_13465
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Entry
NP440_13465 CDS
T08799
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_13465 (addA)
Enzymes [BR:
oon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP440_13465 (addA)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NP440_13465 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_12
ResIII
AAA_30
BMF
AAA_16
DUF5710
Poxvirus_B22R_C
Motif
Other DBs
NCBI-ProteinID:
UUI38352
LinkDB
All DBs
Position
complement(2714137..2717853)
Genome browser
AA seq
1238 aa
AA seq
DB search
MVKWTQEQERAIYQSGTDILVAAAAGSGKTAVLVERIIQKLLKEEDAINIDELLVVTFTN
AAAQEMRARVGAALEKALAEKPGSLHLKKQLSLLQRASISTLHSFCLDIVRKNAYMIELD
PSFRIADEVEMDMIKREVLDELLEGWYDDSNTEQETFFEVVNRFSNDRSDRDVEELILRT
ANFAVQHPSPKAWLHQLTANYEIDENWTEETIPWIQEVKEEISGQLEAMKQENALAIAVA
REPDGPYHYLDALEKDTAILDTAMEKITHWEALHQFVQDAKFAALSRKKADDNPEKREQV
KDFRKKVKDRWDKMKEKWFVRSLPAHIQDMQEMAPVLKQMTLMVEDYMDKFQNRKKEQAI
VDFNDLEHYCLDILTETNPEDNSRQASSIAFQLQKQFKEVLVDEYQDTNLVQESILQLVR
NPEDNGNMFMVGDVKQSIYGFRHAEPSLFIEKYKQFAANDDPAERIDLNRNFRSRGEVLI
GANYLFRQLFDESVGDIAYDEDAELIYGNRMYDEFPFDFNPELLLIDSPQGQKSDGGEET
EEDLEKAQIEARAYAKKIQEWIGTGENGTPMQVVDKGKGQHRNLMYRDIVILMRSMTWAP
VIMDELKKQGIPVYAELTSGYFEAIEIRVMISLLKTVDNPRQDIPLAAVLRSPIVGLQEN
DLAAIRLADRHGNFYDALLAYMAKEDNSVTEQLKEFQELLDNLRLSAQQGALSELIWQIY
RETGYYDFVGGIPGGKQRQANLRALYDRARSYEETSFRGLYRFLRFIERMEEEQKDLGAA
RALSEQEDVVRIMTIHKSKGLEFPVVILGGIGKSFNMMDLNQKYLLHKDLGFASKFIDPE
KRIQYSTLFYHAMREKIRREQLSEEIRLLYVALTRAEEKLFMVGTVDSAEKRKAAWSWIA
HHPDWVLPAYFRVGAKAYLDWIVPALIRHPQGQVLREEEIGNQVLSAITQDASKWEANIY
PRQDIVAFENRVQEKQDALKTHIRNWDPIEQKDKALDAWVDHRLSYQYPYQEAAHSRAKQ
SVTELKRQQEQKDTYSDEKMLPAATKAPITKRPRFMQAEKKLTPAEKGTALHTVMQHLPL
KGMLANEEVEEFIEKLVQEEKMTAAEAESVSTSDIIAFLESAIAQKIFDKKKLYKEVPFS
LMLPAEKVYADWQGASSEKVLIQGVIDCIIPSENGWIILDYKTDRITEEMSEKLEEKLKK
RYKSQLELYRYAIEEIWKQPVEETYLYFFSKGLLIKGE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
gtggttaaatggacacaggaacaggaacgggcaatttatcaaagcggcacggatatcctt
gtagccgcagcagctggttccggaaaaacagctgtccttgtagaacgtattattcagaag
ttattaaaggaagaagatgcaattaatatcgatgaattactcgtcgttacgtttacaaat
gctgctgcccaggaaatgcgggcgagagttggagcagcgttagaaaaggctctggctgaa
aagcctggatcacttcatttaaaaaagcagctgtccttattacagagagcttctatttcg
acattacactctttttgtttagatattgtacgaaaaaatgcctatatgatcgagctggat
ccttctttccggattgccgatgaggtagagatggatatgatcaaacgggaggttctggat
gagctgctggagggctggtatgatgattcgaatacggagcaggaaacgttctttgaagtg
gtgaaccgcttttctaatgaccgaagtgacagagatgtggaagagttaattttacggacg
gcaaattttgcagtccagcatccatcacccaaagcatggctgcaccagctgacggctaat
tatgaaatagatgagaattggacggaagagaccatcccctggattcaggaggtgaaggaa
gaaatatcgggtcaattagaagcgatgaagcaggagaatgcattagctattgctgtggca
agagagccggatggaccgtatcattatctggatgctttggaaaaggatacggcgatactg
gatacagcgatggaaaaaataacgcattgggaggcattacaccaatttgtccaagatgca
aagtttgctgctttatccagaaaaaaagcagacgataatccagagaaacgggagcaagtg
aaggattttcggaaaaaagtcaaggacagatgggacaagatgaaggaaaaatggtttgtc
cgcagcttgcctgctcatattcaggatatgcaggaaatggcacctgttttgaaacaaatg
accttgatggtagaagactatatggataagtttcaaaatcgaaaaaaagaacaggctatc
gttgattttaatgatttggagcattattgtctggacattttaacagagacaaatccagag
gataacagcagacaggcttcttcgattgctttccagctgcaaaagcagtttaaagaggta
ctcgttgatgaatatcaggatacgaacctggtgcaggaaagtattctgcaattagtccgc
aacccggaagataatgggaatatgtttatggttggcgatgtgaagcaaagtatctatggg
tttcgtcatgcagagccttccctgtttatcgaaaaatataaacaatttgccgcaaacgat
gatcccgcagaaagaattgatcttaaccggaatttccggagccggggagaagtgttgatt
ggtgcaaactatttattccgtcagctgttcgatgaatcggtcggggatattgcctatgat
gaggatgctgaattgatttatggtaaccgcatgtacgatgaatttccattcgactttaat
ccggaattgctgctgattgattctccacagggacagaaatccgatggaggagaagaaaca
gaggaagatttagaaaaggcgcaaattgaagcgcgcgcctatgctaaaaaaatacaggaa
tggattggtaccggagaaaatggaacaccgatgcaggtggtggataaaggaaaagggcag
caccgtaatttgatgtaccgggatattgttattttaatgcgttcaatgacatgggccccg
gtaattatggacgagctgaaaaaacaaggtatacctgtctatgctgaactgacctctggc
tattttgaagcgattgaaatcagagtcatgatcagtttattaaagactgttgataatccg
cgtcaggatattccgctggctgcagtactgcggtcgcctatcgtcgggctgcaggaaaat
gatttagcggctatccgcttagctgatcgtcacggtaatttttatgatgctctcttagca
tacatggcaaaagaagataacagcgtaactgagcaattaaaggagtttcaagagctgctg
gataatttaaggttatctgcccagcagggagcgctctcggaattgatttggcagatttac
cgggagaccggctactatgattttgtcggcggtatccctggagggaagcagcgtcaggca
aatttacgggcgctgtatgaccgggcaagaagctatgaagaaacgtcctttcgcggttta
taccgcttcttgcgattcattgaaagaatggaagaagagcaaaaggacttaggtgctgcc
cgtgcactcagtgagcaggaagatgttgtccggataatgacgattcataaaagtaaagga
ctggaattcccggtcgttatcctcggcggcattggcaaatcgtttaatatgatggattta
aatcaaaagtatctgcttcataaggatttgggctttgccagtaaatttattgatcccgag
aaacgaattcaatattctacgttgttttatcatgcgatgcgggaaaaaatcaggagagaa
caattatctgaagaaattcgtctattgtatgttgccttgacacgtgcggaagagaagctg
tttatggtagggacagtggattcggcggagaagcggaaagcagcatggtcctggattgca
caccatccagactgggtgctgccggcttatttccgggttggagcaaaggcttatctggat
tggattgtccctgcgcttatccgtcatccgcagggacaagtcctgcgggaagaggagata
ggtaatcaggttttatctgcgattacgcaggatgcgtccaagtgggaggcaaatatttat
ccacgtcaggatatcgttgcctttgaaaatcgggtacaggagaaacaggatgccttaaaa
acgcatatcagaaattgggatccgattgaacagaaagataaagcgttagatgcttgggtg
gatcaccgtctttcttatcagtatccttatcaggaagctgctcattcacgtgcgaagcaa
tctgtaaccgagttgaaacgtcagcaggagcagaaggatacgtatagtgatgaaaaaatg
cttcctgcagcgacgaaggctccaattacgaaaagaccaagatttatgcaagcggaaaag
aaattaacaccggccgaaaaagggaccgcacttcataccgtgatgcagcatcttcctcta
aaaggcatgcttgcaaatgaagaagtagaggaatttattgaaaaactggtgcaggaggag
aaaatgacagctgcagaagcagaaagtgtatccacttcggatattatcgcatttttagaa
tccgctattgcacaaaagatttttgataagaaaaagttgtataaggaagtgccattcagt
ttaatgctgccggccgaaaaggtatatgctgactggcagggggcctcctcagaaaaagtg
ttgatccagggagttattgactgtattatcccttcagaaaacggctggattattcttgat
tataaaacagaccggattacagaagaaatgtcagagaaattggaagaaaaattgaaaaaa
cgatataagtcccagcttgagctttatcgatacgctatagaagaaatctggaagcagcct
gtggaggaaacctatctctatttcttttcaaaaggactgcttatcaaaggggagtag
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