Oceanobacillus oncorhynchi: NP440_13470
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Entry
NP440_13470 CDS
T08799
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_13470 (addB)
Enzymes [BR:
oon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP440_13470 (addB)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NP440_13470 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UUI38353
LinkDB
All DBs
Position
complement(2717846..2721343)
Genome browser
AA seq
1165 aa
AA seq
DB search
MTVRFILGRSGTDKSEWMMKDIEHRLQKEPIGPAIFYIVPDQMTFQLETALFSREHLNGS
IRAQVASFSRLAWRILQETGGGLKPFISSVGTQMMLRKIIAEKSGDWMAFQKAIKKQGFL
DQLESVIQEFKRYEITPDALRLQQEQFNKFVHQSPSETGLVRKLDDFIYIYEQLLNQLQH
MYMDSEDRLQILMEKIPQASTLEGAHIYIDGFHRFTPQELSVITELMKKCAQVHIGLTLD
PTATENLEELDIFYQTNQTYHQLTAAAEENGISLEQSVYLDPAKDQFKERAYFAHLEQNF
DVRPLPEYKGEAPIQIAEAVHPRAEVEGVAGEILSLVRDEEYRYRDISILVRQPDVYDDL
IETIFGDYDIPVFIDQKRSMLHHPLIELIRSMLEAIENGWRSDAIFRVLKTGFIPASDEE
FPLTSDAIDQLENYTIEYGIRYRKQWLDDKPWKYQRFRGFEQAAQTNTEREMQDKINRYR
NQITHALRPFDESFRAAGSVKERCEAIFIWLESLGAPEKLEEMRASFDEQGIPERGREQQ
QVWDAVLQLMDEMVEIAGDEEMDMTTFNASINAGAEALEFSHVPPTMDHVLVGTIDRSRM
SDVRCMFLLGVNEGIWPMKPTIDGMIDDEERDLLEQNGLKLADNGKRQLLDDWFYIYLSL
TVAKDKLMISYPISDEEGKAKVPSQVVHRIEGLFPATQEHVLFQDVEDTADTTRFITTKT
KTRAALTTQFARLQRGYEIDHAWFAVYNWYVKNQPKYRMTYRILQGLFYKNQPEHLKKET
AEELYPKQIKASVSRLESYYRCSYQHFARYSLNLKERETYKLDAPDIGQLFHEALRLITE
WVQNEKTDFKQLTRETSANYAHRAIQKLSPVLQHQILHSSNRYTFIQQKLEEIIARAAFI
LSEQARQTDFSPIGLELSFGEKDSPLPPLILPLENGYELLLRGRIDRVDKAQLHQDLYLR
IIDYKSSSRALDLLEVYYGLALQMLTYLDVVLTHSEKWLGQQASPAGVLYFHVHNPMINM
DKEKLDSDIEEQIFKSYKMRGLLLSDEDIARMMDESLESGNSHIIPAGLKKDGTFNSNSK
IADEDTFEQLKNHIHGLLKQAGLDMTSGGVEINPFLKKETEACTYCPFHAVCQFDPALEG
NNYRKIANMKEKEVIERLKGGEIRG
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttgactgtgcgatttattttaggcaggtccggtacagataaaagcgagtggatgatgaag
gatattgaacatcgtctgcaaaaggagccgattggtccggctattttttatattgtaccg
gatcaaatgacctttcaattagaaacagctttattcagccgggagcatttaaatgggagt
atccgggcgcaggttgccagtttttcacggcttgcatggcggattttacaggaaacaggg
ggcggattaaagccttttatcagttcggttggaacccaaatgatgcttcggaaaatcatt
gctgaaaaaagcggagattggatggcttttcaaaaagcaatcaaaaaacaaggatttttg
gaccagttagaatctgttattcaagaatttaagcgatatgaaattacacctgatgcactt
cggttacagcaggagcaattcaataaatttgtgcatcaatctccctcggaaacagggtta
gtccgaaaattggatgatttcatttacatttatgaacaacttcttaaccagctgcagcat
atgtatatggacagtgaagacagactgcagatattaatggaaaaaattccgcaggcaagc
acgctggaaggagcacatatttatattgacggcttccaccgctttacgccgcaggagctg
tccgtaatcacggaattaatgaagaaatgtgcgcaggttcatattggtttgacattagat
ccgacagccacagagaatctggaggaactggatatcttctaccagacgaatcaaacctat
caccaattaacagctgcagcggaagagaacggtatttcgctggaacagtctgtttattta
gatccggcaaaggatcagtttaaagagcgtgcctactttgctcacttagaacagaatttt
gacgtacggcctttaccggaatacaaaggggaggctccgattcaaatagctgaagcagtg
catccgcgtgcagaagtagagggtgttgcgggagaaattctttcccttgtcagagacgaa
gaataccgctatcgggatatttccattttagtaagacagccggatgtatatgatgattta
atagaaacgatttttggcgattatgatattcctgtttttattgaccagaagcgttcgatg
ctgcatcacccattgattgaactgattcgttcgatgctggaggcaattgaaaatggctgg
cgttccgatgccattttccgggttttaaaaaccggctttatccctgccagtgatgaggag
tttcctttaaccagtgacgccattgatcaattagagaactatacgatagaatatggtatt
cgttaccggaagcagtggttagatgataaaccttggaaatatcaacgtttccgcggattt
gaacaggctgcacagacaaacacggaaagggagatgcaggataaaatcaatcgttatcgc
aaccaaataacgcatgcactccgtccttttgatgaaagctttcgtgcagcaggaagtgta
aaagagcgctgtgaagctatttttatttggctggaatcgctaggcgcacccgaaaagctg
gaagaaatgcgtgcatccttcgatgaacagggcattcctgaaagaggaagggagcagcag
caggtctgggatgcagtgctccaattaatggatgaaatggtagaaatagctggtgacgaa
gaaatggatatgactactttcaatgcttccatcaatgccggcgcagaagctttggaattt
tcacatgtgcccccgaccatggatcatgtgttagtgggaacgattgacaggtcaagaatg
tctgatgtccgttgcatgtttttacttggtgtgaatgaaggaatatggccaatgaagccg
acaattgatggcatgattgacgatgaagaaagagatttgctggagcaaaatggcttgaag
cttgcggataatggaaaacggcagctgctggatgattggttttatatctatttatcttta
actgtagcaaaggataagctgatgattagttatccaattagtgatgaggaaggaaaagcg
aaggtcccttctcaggttgttcatcgaatagaaggcctgtttccggcaacgcaggagcat
gtattatttcaagatgtggaggatactgcggatacaacgcgatttattacgaccaaaacg
aaaacaagagcagctctgacaacgcaatttgcaagattgcagcgcggctatgaaatagat
catgcctggtttgctgtatataattggtatgtaaaaaatcagccgaaataccgtatgacc
tatcgcatattacaaggcttattttataaaaaccagccggagcatttaaaaaaggaaaca
gcggaagaactttatccaaaacaaatcaaggcaagcgtcagccgtctggaatcttattac
agatgttcgtaccagcattttgcccgttacagcttgaatttgaaagaaagagaaacatat
aaattggatgctccggatatcggacaattattccacgaagcattacgcctcattacagag
tgggttcaaaatgaaaaaacagactttaagcagcttaccagggagacatcggcaaattat
gcacaccgggcaatccagaaattatctcccgtactgcagcatcaaatcttgcacagctcg
aaccgttacacatttattcagcaaaagctggaggagattattgccagggcagcatttata
ttaagtgagcaggcaagacagacagatttcagcccaattggtcttgaactcagctttgga
gagaaggatagcccgctgcctccgcttattttgccgcttgaaaatgggtatgaactgctg
ctgcgcggaagaattgaccgggtagataaagcacagcttcatcaggatttatatttacgg
attatcgactataaatcaagctcccgtgcgctggatttattggaagtttactatggactt
gccctgcaaatgctgacgtatttagatgttgtactgactcattccgaaaaatggctcggt
cagcaggcgagcccggcaggcgttctttatttccatgtgcataatccaatgatcaatatg
gataaagagaaattagacagcgatatcgaggagcaaatctttaagtcttataaaatgaga
ggactgctcttatctgatgaggacatcgccagaatgatggatgagtcattagaatctggg
aacagtcatattattcctgccggactgaaaaaagatggtacattcaacagcaattcgaaa
attgcggatgaagatacatttgaacaattgaaaaatcatatccatggattactgaagcag
gcaggactggatatgacttcaggcggagtagaaattaatccgtttctgaaaaaagagacc
gaagcatgtacttattgtccttttcatgcagtttgtcagttcgatcctgcgttagaagga
aataattatagaaaaatagcaaatatgaaagaaaaagaagtgattgaacggctaaaggga
ggggaaatccgtggttaa
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