Oceanobacillus oncorhynchi: NP440_13800
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Entry
NP440_13800 CDS
T08799
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NP440_13800 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_13800 (xseA)
Enzymes [BR:
oon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NP440_13800 (xseA)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NP440_13800 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Importin_rep_6
Beta-barrel_RND_rel
DUF4446
Motif
Other DBs
NCBI-ProteinID:
UUI38418
LinkDB
All DBs
Position
complement(2787511..2788881)
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AA seq
456 aa
AA seq
DB search
MKDNYLTVTALTRYVKRKIDTDPHLRQVWLRGEISNFKHHSRGHMYMTIKDDNARIQAVM
FSSNNSRLVFRPENGMSVLIRGEVSVYEASGQYQLYIRDMEPDGIGALYQAFEQLKEKLQ
TEGLFLDDQKKKIPAYPNHVGVITSPTGAAVRDIVTTIERRAPSVKITVLPVSVQGPQAT
SSIVKKIQYANAFPEEYDVLIVGRGGGSIEELWSFNEEAVARAIYASEIPVISAVGHETD
TTIADFVSDLRAPTPTGAAELAVPSQKEQLDKVSYLAQRLSQVMRTDIQMHRKRLESLSQ
TYAFKYPKQLIAQKEQELDSMLDSLNKSLKARMEQKQLRYTHLKQRLDTQHPEQEIKTAA
DKNSKLLAELNRSMKQLFAKSESDLQTSINKLTLVNPLAVMARGYGISYSQDGDVIKSIK
DVNEGDPIDVRLQDGYLHANVQKIKEVDQSGGRKEI
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagataattatctgacggttactgcactaaccaggtatgtgaagcgtaagatagat
acagacccccatctgcgacaggtttggctgcgaggggaaatatctaactttaaacaccat
agccgcggacacatgtatatgaccattaaggatgataatgcccgtatccaggcagtgatg
ttctcttcgaataacagcaggcttgtttttcgtccggaaaatggcatgagtgtgcttatt
cggggagaggtaagtgtctatgaagcaagcgggcaatatcagctttatatccgtgacatg
gagccagacggcatcggggcgttgtatcaggcttttgagcaattgaaagaaaaattgcaa
acagaaggcttatttcttgatgaccagaaaaaaaagattcctgcttacccgaatcatgtc
ggcgtcattacatctccaaccggggcagctgtccgtgatattgtgacaacgattgaaaga
agagcaccttctgtgaagattacagtgctgccggtatctgtgcagggtccgcaggcgacc
agttccattgtgaaaaagattcaatatgcgaatgcttttccagaggagtatgacgttttg
attgtcggccgcggcggcgggtcgattgaggagttgtggagctttaacgaagaagcagtg
gcacgagcgatttatgcatcggagattcctgttatttctgctgtggggcatgaaacagat
acaacaattgctgattttgtatctgatttacgtgcgccgacgccgacaggagcagctgag
ttagctgtcccttcgcaaaaggaacagcttgataaagtatcgtatttagcgcagcgtctg
tcacaggtgatgcgtacagatatacaaatgcatcgtaaacgattggaatcattaagccaa
acctatgcatttaaatacccgaaacagctgattgcccaaaaagaacaagaactggattcg
atgctggattcattaaacaagtcgttaaaagcaagaatggaacagaagcagcttcgttac
acgcatcttaaacagaggctggatacacagcatccggagcaggaaataaaaacagcagca
gataaaaatagtaaattgctggcggagttaaaccgatccatgaaacagctgtttgcaaaa
tcagaaagcgacttacagacttctatcaacaaattaacactggttaacccgcttgctgtt
atggcacgaggttatgggatcagctatagtcaagatggtgatgtgattaaatccatcaag
gatgtgaacgaaggagatccaatcgatgtacggctgcaggacggatatctgcatgcaaac
gtacaaaagataaaggaggtagatcagagtggcggaagaaaagaaatatga
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