Oceanobacillus oncorhynchi: NP440_14130
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Entry
NP440_14130 CDS
T08799
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oon03019
]
NP440_14130
03009 Ribosome biogenesis [BR:
oon03009
]
NP440_14130
Enzymes [BR:
oon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NP440_14130
Messenger RNA biogenesis [BR:
oon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NP440_14130
Ribosome biogenesis [BR:
oon03009
]
Prokaryotic type
rRNA helicases
NP440_14130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
UUI38475
LinkDB
All DBs
Position
complement(2842506..2843819)
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AA seq
437 aa
AA seq
DB search
MEKTFAELSLDMDIQDIIQELDFRNPTAIQEKVIPAILDGKSVIGQSRTGSGKSHAFLLP
MFQQLDENQKKVQFVITAPTRELAIQLYNEVRKIITIADKTEKWTAKLLVGGTDKQKAIE
KLKTPPMIVVGTPGRILDLVKDGALSIYSAESFVIDEADLMLDLGFIEEVDQLLVRAKQD
IQLLVFSATIPQRLQHFFKKYLRNPEYIKMEEHFSPETMEHRLILKKHRDEAKIIWDISK
TIHPYLALVFTNGKQQANELAEALGGYGLDVGVIHGGLTPRERKRVLKEIQQLRYQYVVA
TDLASRGIDIKGVSHVINAQLPKEEHFYIHRVGRTARAGLEGTAVSIYSEEDARLIERLE
QKGLTFSFVEVKQGEWTEDKSWNERTRRKTEDTSNDREAWKRVRKAKKVKPGYKKKQKQQ
QQQIKRQLTKEQNRKKR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatttgcagaactatccctggatatggatatccaggatattattcaagaa
ttggattttagaaatccgactgcaatccaagaaaaagtaatacctgctatcttggatgga
aaaagtgttattggtcaatcccggaccggttccggcaaatcgcatgcatttttattgccg
atgtttcaacagctggatgagaatcaaaagaaagtgcagtttgtaattactgcgccaaca
agggaactggcaatacagctttacaatgaagtaaggaaaatcattacaattgcggataag
acagaaaaatggacagccaagctgcttgtcggcggtaccgataaacaaaaggcaattgag
aaattaaaaacaccgccaatgattgtggtggggacaccagggagaattttagatttggta
aaggatggagcattatccatctatagtgcggaatcgtttgtgattgacgaggcggacttg
atgcttgatttaggctttattgaagaagtagatcaattattagtacgcgcgaagcaggat
attcagctgctggtcttctcggcaactattccacagcgcttacagcatttctttaaaaaa
tatttaagaaatccggaatatattaaaatggaagagcatttttctccggaaacgatggag
catcggcttattctgaaaaagcatcgggatgaagcgaagattatttgggatatttccaag
acaatccatccctatttagcgctggtatttacaaatgggaaacaacaggctaatgagctg
gcagaagcgcttggaggctatggcttggatgttggtgtcattcatggcggtctgacgccc
cgggagagaaagcgtgtattgaaagagatacagcagctgcgctatcaatacgtagtcgca
acagatttagcttcaaggggaattgatatcaagggtgtcagccatgtaattaatgcccag
cttccaaaagaagagcatttttatattcatcgtgtcggcaggacagcacgagccggacta
gagggcacagcagtcagtatttacagcgaagaggacgcccgtttaatcgaaagattggag
caaaagggactcacgttctcgttcgtagaggttaagcagggtgaatggaccgaggataaa
tcctggaatgaaagaacacgccggaaaactgaagacacaagtaatgaccgggaagcgtgg
aagcgcgtaagaaaagcaaagaaagtaaagccgggctataagaaaaaacaaaagcagcag
caacagcaaattaaaagacagctgacaaaagagcaaaacaggaagaagcgttag
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