Oceanobacillus oncorhynchi: NP440_14500
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Entry
NP440_14500 CDS
T08799
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP440_14500 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oon03019
]
NP440_14500 (rny)
Messenger RNA biogenesis [BR:
oon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NP440_14500 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
UUI38546
LinkDB
All DBs
Position
complement(2919213..2920775)
Genome browser
AA seq
520 aa
AA seq
DB search
MNTVIIIISILLALVVVFVVGYLVRKSIAEAKISSAETLAKQIMEEARRNADTAKKEALL
EAKDENHQLRSQAEDEIRERRMEAQKQENRLMQKEENLDRKGETLDKREVLLEQKEQTLV
EQQQQMEEMKSKVEAMKDEQQAELERISGYTTEQARQVILERIEKEVQHESAVMIKEAEN
RANEEADKKAKNILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARMALERLVQDGRIHPARIEEMVEKSRRDVDEYIR
EVGEETTFEVGIHGLHPDLVKILGRLKYRTSYGQNVLKHSMEVAYLSGLLAAELGEDINL
AKRAGLLHDIGKAIDHEVEGSHVEIGKELAMKYKEPEVVINSIASHHGDEEATSVIAVLV
AAADALSAARPGARSETLENYIKRLEKLEEISESFEGVEKSFAIQAGREIRIMVRPDDID
DMESARIARDIRKRIEGELDYPGHIKITVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgtgattattatcatctccattttgcttgctctagtcgtcgtatttgttgtt
ggttatctggtacgtaaatctattgcagaagctaaaatttctagtgcggaaaccttagcg
aaacaaattatggaagaagcacgcagaaatgcagatactgctaagaaagaggcgcttcta
gaagcaaaagatgagaatcatcagcttcggagccaagccgaagatgagattcgtgagcgt
cgtatggaagctcagaagcaagaaaatcgtctgatgcaaaaagaagaaaatctggacaga
aaaggtgaaacattagacaaacgtgaggttctgctcgaacagaaagaacaaactcttgtg
gaacaacaacaacaaatggaagaaatgaaaagcaaagtggaagctatgaaagacgagcag
caagctgagcttgagcgcatttcaggatatacaaccgagcaggcgagacaagttatttta
gagcgcatcgaaaaagaagtacagcatgaatcagcagtcatgattaaagaagctgaaaat
cgtgcgaatgaggaagctgataagaaagcaaaaaatatcttatcgcttgcactgcaaaga
tgcgcagctgaccacgttgctgaaactacggtttctgttgtgaatttgccgaatgatgag
atgaaaggccgtattattggacgggaaggccgaaatatccgtaccttagaaacattgaca
ggaattgatttaattattgatgatacacctgaagcggttattctatccggttttgaccca
atacggcgtgaaatcgcacgaatggcgttagaaagacttgtacaagatggcagaatccac
cctgcgcgtattgaggaaatggttgaaaaatcgagacgtgatgttgacgaatatatacgt
gaagtgggcgaggagacaacatttgaagttggtatccacggattacatccggatcttgtg
aagattctaggtcgtttaaaatatcgtacaagctacggtcaaaatgtcttgaagcactca
atggaagttgcttacttgtcaggactgctggcagcggaattaggagaagatataaatctt
gctaaaagagctggtctgctgcatgatatcggaaaagcgattgatcatgaagtagaaggc
agtcatgttgaaattggtaaagaattagcaatgaaatacaaagaaccagaagtggttatt
aattcaattgcttcccaccatggagatgaggaggcaacctctgttatagctgtattagtt
gcagctgcagatgcactttctgccgccagaccgggagctcgaagcgaaacccttgagaat
tatatcaagcgtttagaaaaattagaagagatatctgagtcgtttgaaggcgtagagaag
tcatttgccatccaagccggtcgtgaaattcgtatcatggttcgtcctgatgatattgat
gacatggaatcagcgagaattgcacgtgatatcagaaaacgtattgaaggggagctcgac
taccctggacatattaaaattacggttattcgggaaacaagagcagttgaatacgcaaaa
taa
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