Oceanobacillus oncorhynchi: NP440_14620
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Entry
NP440_14620 CDS
T08799
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oon03016
]
NP440_14620 (truB)
Enzymes [BR:
oon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NP440_14620 (truB)
Transfer RNA biogenesis [BR:
oon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NP440_14620 (truB)
Prokaryotic type
NP440_14620 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SidF
Motif
Other DBs
NCBI-ProteinID:
UUI38569
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All DBs
Position
complement(2946240..2947127)
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AA seq
295 aa
AA seq
DB search
MNGILPLWKPKGMTSFDCVAKCRRYFHTKKVGHTGTLDPEVEGVLPICIGNATKIVPFLT
DTKKVYVGTVALGSTTETEDATGNIVEEKEVTHMPGKIEIEAVLEKFQGTITQIPPMYSA
VKVNGKKLYEYARANEKVERPSREVFIHDIQLGSIDEEKNAFDIYVECSKGTYIRTLCVD
IGKELGYPAHMLQLERIQTGSFSKKNTVTFAMIEEAAARGEQEQLLSPISEGVSHLVHQE
VDDALMFRIKNGQKLAVTDAPLTNNPFVFTNNEEVLAIYEKHPEKPDQIKPLRVF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtatcttaccgctgtggaagccaaaaggaatgacttcttttgattgtgtagct
aaatgccgccgctacttccatacgaaaaaggttggtcatacagggacattggatccggaa
gtggaaggcgtgctgcctatttgtattggcaatgcgaccaagattgttccctttctcaca
gatacaaaaaaagtttatgttgggacagttgcattaggatccactacagaaacagaggac
gccacagggaatattgtagaagaaaaagaagttacgcacatgccgggaaaaatagagatt
gaagcagtgttagaaaagtttcaaggaacgattacacaaataccgcccatgtattctgct
gtaaaggtcaatggaaaaaagctgtatgaatatgccagagcaaatgaaaaagtagaaaga
ccaagcagggaagtctttattcatgatatacagcttgggtctatagatgaggaaaaaaac
gcttttgacatctatgtagaatgctccaaggggacctatatcagaacattatgtgtggat
atcgggaaggaattaggatatccggcacatatgctgcagttagaaagaatccaaaccggt
agtttttccaagaaaaatacggtcacttttgctatgatagaagaggcggctgccagaggt
gaacaagagcagttattaagcccgatttcagagggggtaagtcatctagtacatcaggaa
gtagatgatgcattaatgtttcggattaaaaatggtcaaaaattagctgttaccgatgct
cctctgacaaataatccgtttgtgtttacaaacaacgaagaagtactagccatttacgaa
aagcatccggaaaaaccggatcaaattaaaccattaagggtattttaa
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