Oceanobacillus oncorhynchi: NP440_14705
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Entry
NP440_14705 CDS
T08799
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon02020
Two-component system
oon02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NP440_14705
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NP440_14705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oon03021
]
NP440_14705
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
oon02035
]
NP440_14705
Transcription machinery [BR:
oon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NP440_14705
Bacterial motility proteins [BR:
oon02035
]
Flagellar system
Flagellar assembly proteins
Stator
NP440_14705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
Motif
Other DBs
NCBI-ProteinID:
UUI38586
LinkDB
All DBs
Position
complement(2964974..2965750)
Genome browser
AA seq
258 aa
AA seq
DB search
MSSLEPSQEQILWKHWMTSQDNEAANLLIENYMYLVSFHTERIVSQLPNRVDREEIRSYG
LLGLYDALHKFELKRDLKFDTYASFRIKGSIMDGLRKEDWLPRSIREKTKKVEQASEIFE
QKNQREAQPEDIAEMTGMPIQDVEITLRDMVLSNMLSIEDKPKGQENDLKEGIGYNVSDK
PELRPEERLIQEEWKDELIEGIKSLNEKEQLVISLFYQEELTFTEIGQVLELTTSRISQI
HKRSIVKLRSTLQKITQV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgagttcattagagccttcacaagaacaaattttatggaagcattggatgaccagtcaa
gataatgaagcagcaaatctactcattgagaactacatgtatcttgtttcctttcatacg
gaaagaattgtaagtcaattgcctaatcgtgtggatcgtgaagaaatccgcagctatggc
ttgctgggtctgtatgatgcattgcacaaatttgagctgaaacgtgatttgaaatttgat
acatatgcctcatttcgaattaaaggttcgatcatggatggattaagaaaagaagattgg
ctgccacgttcgattcgtgagaaaacaaaaaaggtggagcaggcaagtgagatttttgag
caaaaaaatcaacgggaagcacagccggaggatattgccgaaatgacaggaatgcctatt
caggacgtcgaaataacattacgggatatggtactgagcaacatgctttctattgaagat
aaaccaaaggggcaggagaatgacctgaaagaaggtattggctacaatgtatcagataaa
ccggagctcaggccggaagaaaggcttatccaagaagagtggaaggacgaattaatagaa
ggaatcaagtcattaaatgaaaaagaacagcttgttatcagtcttttttatcaagaggaa
ttaacctttacagagattggacaagtattggaattaacgacttcccgtatttcacaaatc
cataagcgaagcattgtaaaattacgctcaacgctgcaaaaaatcacccaggtttaa
DBGET
integrated database retrieval system
