Oceanobacillus oncorhynchi: NP440_15790
Help
Entry
NP440_15790 CDS
T08799
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03030
DNA replication
oon03430
Mismatch repair
oon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NP440_15790 (dnaE)
03430 Mismatch repair
NP440_15790 (dnaE)
03440 Homologous recombination
NP440_15790 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oon03032
]
NP440_15790 (dnaE)
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_15790 (dnaE)
Enzymes [BR:
oon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NP440_15790 (dnaE)
DNA replication proteins [BR:
oon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NP440_15790 (dnaE)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NP440_15790 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
DUF655
Motif
Other DBs
NCBI-ProteinID:
UUI38786
LinkDB
All DBs
Position
complement(3182830..3186147)
Genome browser
AA seq
1105 aa
AA seq
DB search
MTYTHISVKSGYSLMESTISIPKLVQKAKYLQYQSLCLTDEAVLYGAVSFYKACMDQGIK
PIIGMRISVQMDDNEQEIPCIVLAKNKTGYQQLLQLSTYLQTNQLDKLPVEQLGEYTDGV
IGVLSGKAFLRAGNDSSETESQLLFQQLKKAEAYFEEGDFYVGIDSASHQLQIWKKADFA
YVAMQNVVYLDEQDVLAYDCLQSMRFGEKWAPKRKEQLPEGHHFTSPEEMKQLFHTWPEL
LDKTEEIAGKCTAYLHFDEQHLPSFPTPDQVTADTYLRERCEEGLQERYPVVTEAHRKRM
EYELNTIINMNYSDYFLIVADFIQFAKDKHIMVGPGRGSSAGSIVAYILGITEVDPLKYN
LLFERFLNPERLTMPDIDVDFSDIRRDEVIDYVRDKYGREHVAQIITFGTFATRSILREL
MKTMDVHDQDVAYILREMKRASSKSIQRLLQDSTELASYVKASEKLKVLFTIAIKLEGLP
RNVSTHAAGVVISEQPLMRDVPLTSGTGETYLTQYAMNELEAAGLLKMDFLGLRNLSLIE
RVMKGVAYTQNKGEILTHIPEQDEKTFAMLRQGETSGVFQLESTGMQRVLKELQPSSFED
IVAVNALYRPGPMDFIPVYIRRKFKQEAVTYPHPDLEPILKSTYGVLIYQEQIMQIAHRI
AGFSLGEADILRRAVSKKKDNMMQQQEAAFIKGCLKNGYSQAVAAEIFSWIVRFSNYGFP
RSHAVAYSKISYQLSYLKAHYPEVFFSCLLTDAKNQPEKLSMYQESLKELAIKILPPHIN
RSYQQFTVEKNMIRTGLAAIKSISYQALVHILEIRKEASFTSFFDFCMRIDIKKVNRAAI
KNLILAGAFDTFHPNRASLIETINPALEQKELFQGMYEDASLFQDALEYTEAEDYSKIQK
LTFEKELMGIYISNHPFESYRNVLRANGILSFKQAEEFIGKRKEIYTVGVVEEIKIIRTK
NRERMAFLTVSDEDKKMDAVLFPDLFRQISNQLEEEQLVWMRVTVEERNQKRQFILKEIA
ALDLSEVDIPETNKLFIRMTNQDKSSVLKYLQQIAEQHPGKTPVIVYDPVNRETYQLANS
YSLQVTEKEMRQLKNYFGNDNVVER
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacacacatatatcggtgaaaagcggctatagtttaatggagagcactatttct
ataccaaagcttgttcaaaaagcaaaatatttacagtatcaaagcctctgtttaacagat
gaggctgttctttatggtgctgtttcattctataaagcttgtatggatcaggggattaag
ccgattattggcatgcggatttctgttcagatggatgataatgaacaggagattccatgt
atcgttctcgctaaaaataaaacaggctaccagcagcttctacagttaagcacctatctg
caaacaaatcagcttgataagctgccggttgaacagcttggggaatatacagacggtgtc
atcggtgtactctctggaaaggcattcctgagggctggcaatgattcctccgaaacagaa
agccaactactctttcaacagcttaaaaaggcagaagcttattttgaagaaggtgacttt
tatgtcggcatcgattcagcttcacatcagctgcaaatatggaaaaaggcggacttcgct
tatgtggcgatgcagaatgtagtgtatttagacgaacaggatgtattggcttatgattgc
ctgcaatcgatgcggttcggggagaaatgggctccaaaacgaaaggaacagctgcctgaa
ggtcatcattttacttctccggaggaaatgaagcaattatttcatacttggccggagctg
ctggataagactgaagaaatcgcaggaaaatgtactgcctatttacattttgatgagcag
catctgccttccttccccacgccggatcaggtaaccgcagatacctatttgcgggagcgc
tgtgaagagggtttgcaggagcggtacccggtcgttacagaagctcatcgaaaacggatg
gaatatgagctgaatacgattatcaatatgaactacagcgattattttttaattgttgcc
gattttattcaatttgcgaaagataaacatatcatggtcggaccgggaaggggatcatca
gctggttccattgttgcttatattttaggaatcacagaagttgatccattaaaatataat
cttctgttcgaacgttttttaaatccggaacggctgaccatgccggatattgatgtagac
ttttctgatatccgccgtgatgaagtaattgattatgtaagagataaatatggcagggag
catgttgcacagattattacttttggcacctttgcgacacgctcgattctccgagaactg
atgaaaacaatggatgtccatgatcaggatgttgcttatattttgcgggaaatgaagcgg
gcatcatccaaaagtattcaacggctgctgcaggattcaacggaattagcatcctatgta
aaggcctctgaaaaattaaaggttttatttaccatcgcgattaaattagaaggcttgcca
agaaacgtgtctactcatgctgcgggcgttgtgattagtgagcagcctttaatgagagat
gttccgttgacaagcggcacaggggaaacgtacttgacacaatatgcaatgaacgaattg
gaagccgcaggtctgttgaaaatggacttcctggggctccgaaacctttcgttaatagaa
agagtcatgaaaggtgtggcatatacccaaaacaaaggagaaatattgacccatattcca
gaacaggatgaaaaaacgtttgccatgctgcgacaaggggaaaccagcggtgtttttcag
ttagaatcaacaggaatgcagcgtgttctaaaagagctgcaaccatcctcgtttgaagat
attgtagcggttaatgcgctttatcgtccaggtccgatggattttatccctgtgtatatc
cggcgtaaatttaagcaagaagctgtaacctatccgcatccagatttagaaccgatttta
aaatcaacctatggtgttctgatttatcaggagcagatcatgcagattgcgcaccgtatt
gccggtttcagtcttggtgaggcggatattttaagaagagcggtaagtaagaagaaagac
aatatgatgcagcagcaggaggcagcctttatcaaagggtgcttaaagaatggctactct
caggctgtggctgcggaaattttcagctggattgtccgcttttccaactatggatttcca
agaagccatgctgtcgcctatagtaaaatatcctatcagctcagttatctgaaagcacat
tatccagaagtatttttttcatgcctgctaacggatgctaaaaatcagcccgaaaagctg
tctatgtaccaggagtcgttaaaagagcttgcaattaagatactcccgccacatattaat
agaagctatcagcaatttacagtggagaaaaacatgatacgtaccgggttagctgctatt
aagtctatcagttatcaagcgttggttcatattttagaaatccgaaaagaggcttctttc
accagcttttttgatttttgtatgcgaatcgatataaaaaaagtaaatcgggccgctatt
aaaaacctgattttagctggtgcatttgatacgtttcatcccaatagggcaagcttgatt
gaaacgattaatccagcgctggaacaaaaggaattgtttcaggggatgtatgaagatgcc
tccttatttcaggatgcgttggaatatacagaagcggaagactactccaaaatacaaaag
ctcacttttgagaaagaattgatgggtatctatatctcaaatcacccatttgaaagttac
cggaatgtattaagagcgaatggaatactttcttttaaacaggcagaggagttcatcggg
aagagaaaagaaatctataccgtcggagtagtagaagagataaagattatacgcacaaaa
aacagagaaagaatggcatttttaacagtgtcggacgaagataaaaagatggatgctgtt
ctttttccggatttatttcggcaaatttcgaatcagctggaagaggaacagctggtttgg
atgcgtgttacggtcgaagagagaaaccagaagcgtcagtttattttaaaggaaatagca
gcactggatttgtctgaagtggatataccagaaacgaataaattatttatacgaatgaca
aaccaagataaaagcagtgttttgaaatatttgcagcaaatagctgaacagcatccgggg
aagacgccggtaatcgtatatgatcctgtaaacagagaaacctaccagcttgcaaacagc
tattctcttcaagtgacagagaaagaaatgagacagctgaaaaattattttggaaatgat
aatgtggttgagcgctga
DBGET
integrated database retrieval system
