Oceanobacillus oncorhynchi: NP440_16310
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Entry
NP440_16310 CDS
T08799
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_16310
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP440_16310
Archaeal homologous recombinant proteins
NP440_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
NACHT
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
UUI38887
LinkDB
All DBs
Position
complement(3293605..3296691)
Genome browser
AA seq
1028 aa
AA seq
DB search
MQPLQLTLHAFGPYKEKEVIDFSKLQGNTLFVISGKTGAGKTTLFDGIAFALYGKASGSD
REDQRMLRSDFADENVHTSAELIFQIQDKTYRIFRQLGHVKKGNKSKTGDKCEFYEVRPD
GESPCVDRQMVSEIDQKIEDIIGLTPDQFKQIVMLPQGEFRKLLTSDTENKEEILRRLFR
TAHYKYMNELLREKKAKLEKENQRILNRMEQLGTQIFSLDLPDEAEIRELADREHVNTNQ
IIEALETELKKNEAVYTEEDAHYKEATKQQELTQNHLFQVKQINERFLELETYQKNLAIW
KEQAQEMEALKKGLSAAEQAKLMIPYEQQKDEAWKELEEGNKHLQQLEAQKDTMEKQKQQ
AEADFKKEQENAGKREKLSIEVNRLEQFLPVVKELEGKKQEIQKLAAQLKQGNEQLEKLK
ALRETKSKQIDRLEQEEQVLDKEADKLDTVKEALRILREQAMLMKKYKEKTAQVQKSETE
VKRTEDVYLQEKEAYNRLEQAWFANQAHVLAVHLHDGEACPVCGSLEHPSPAATKEAEVS
KEELEQAKKLMEKKETDWREQTANLKAYQSERKGLEEELAQHEFVFTDPEQSYQDIVERG
KKKKAEEDRLKQSKIRLSDCKKELARERQEQKQREVEWNEKTNQASRLQSDYHSKEAVYQ
QQLIQIPENLRVLSQLEAEITHLKTKKQQLEQRWVEVQENYQKVHEAFTKWTADVHHLRE
NQAKMKQKADNLKKTFQEKLEQADFTEKGYQEAKWEEATYQSVKQRLSEYEKKGYQLEKQ
ISELQQKLEGQSKQDVYEIEAVLEKWKQKTTASLEKLQRLQQEKKDMTFYVDQLQEFHHQ
SADIEQKRMLVTDLYDTLRGQNPKKVSFERYLQMEYLDQIIEAANLRLNDLSNGQFYLTR
SDRQEARGKQSGLGLDVYDQYTGQTRDVKTLSGGEKFHASLCLALGMSDVIQSFQGNIVI
QTMFIDEGFGSLDEESLRKAIDALIQLQQSGRMIGIISHVQELKDVFPAAIEVHKTKEGC
SKTEIVVK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctttacaattaacattacatgcttttgggccctataaggaaaaagaagtaatc
gatttttctaaactgcaagggaacacattatttgtcatttccggaaaaaccggggcagga
aagacgacgttatttgatgggatagcctttgcattatatggaaaagcaagcggatctgac
cgggaagaccagcgtatgcttcgcagtgattttgcagatgaaaacgtacatacttctgcg
gagcttatttttcaaatacaagataaaacgtatcgtattttccggcagctgggtcatgtg
aaaaaaggaaataagagtaaaacaggagataaatgcgaattttacgaagtgcggccagat
ggagaatcgccgtgcgtagacagacaaatggtaagcgaaattgaccaaaaaatagaagat
attattggtttgactccagatcaatttaagcagattgtaatgcttccacaaggggagttt
cgaaaactgttaacttctgatacagaaaataaagaagaaatcctgagacgtttgttccga
accgcgcattataaatatatgaatgaactgctccgggagaagaaagcaaaattagaaaaa
gaaaatcagcgtattctcaaccgtatggagcagctggggacgcaaatattttccttagac
cttccagatgaagccgaaatccgtgagttggcagatagagagcatgtcaatacgaatcaa
attatagaagctttagaaacagagcttaagaaaaatgaagcagtgtatacagaagaagat
gctcattataaagaagcaacaaagcagcaggagctcacgcaaaaccatttgttccaagtc
aaacagatcaatgagcgttttttggaattagaaacctatcaaaagaatcttgccatatgg
aaagaacaagcacaggaaatggaagctttaaagaaaggtttgtctgctgctgaacaggcg
aagctgatgattccttatgagcagcaaaaggatgaagcttggaaagaactcgaagaagga
aacaaacacctgcagcagctggaagcgcagaaggacaccatggaaaagcaaaagcagcag
gcagaagctgattttaaaaaagaacaggaaaatgcaggaaagcgcgagaagctttcgatt
gaagtaaaccgcttagaacaatttcttcctgttgttaaagaattagaagggaaaaagcag
gagattcaaaagcttgcggcacaattaaagcaagggaatgaacagctggaaaaattaaaa
gcgctacgtgaaacaaaaagtaaacaaatagatcgtttagagcaggaagaacaggtacta
gataaagaggcagacaagctggacaccgtaaaagaagcgttaagaatactgcgtgaacaa
gcaatgctgatgaaaaaatataaagaaaaaacggcacaggtgcaaaaaagtgagacagag
gttaaacgtacagaggatgtttatctgcaggaaaaagaggcttacaatcggcttgagcag
gcttggtttgctaatcaggcgcatgtattggctgttcacctgcatgatggagaagcctgt
cccgtctgcggaagcttagaacatccgtcaccagcagcaacgaaggaagcggaagtcagt
aaggaagagctggaacaagcgaaaaagctgatggagaagaaggaaacagactggcgggag
caaacagccaacctgaaagcgtatcaatcagaaagaaaaggattggaagaggaactcgca
cagcatgaattcgtatttactgacccggaacagagctatcaggacatcgttgaaagagga
aaaaagaaaaaagcggaagaggatcgcctcaagcaatctaaaatccgtttatcagattgt
aaaaaagaattagcacgggagcgtcaggaacaaaagcaaagagaagtggaatggaatgaa
aagaccaatcaggccagccggctgcaatcggattatcacagtaaagaggctgtctatcag
cagcaattgattcaaataccggaaaacctgcgcgttctttcccaattagaagctgaaata
acccatttaaaaacaaaaaaacagcagcttgaacaacgctgggtagaggtgcaggagaat
tatcagaaagtccatgaagcattcacaaagtggacggctgatgtgcaccaccttagagaa
aaccaggcgaaaatgaagcagaaagcagataatctgaagaagacctttcaagagaaattg
gagcaggcagattttactgaaaaagggtatcaagaagcaaaatgggaggaagcaacgtat
caatccgttaaacagaggctctctgaatatgaaaaaaagggctatcaattagaaaagcaa
atttccgagcttcagcagaagctggaaggtcagtcgaagcaggatgtatacgaaattgaa
gctgtgttagaaaaatggaagcagaaaacaacagccagtcttgaaaaattacagcggctg
cagcaggagaaaaaggatatgacattctacgtggatcagctgcaggagttccaccaccaa
tcggcggatatagaacagaaaagaatgctcgttacagatttatatgatacgctgcgtgga
caaaatcctaaaaaggtatcttttgaacggtatctgcagatggaatatttagatcaaatt
atcgaggctgctaatttacgcttaaatgacctatcgaatggtcaattttatctgacaaga
agtgatcgccaggaagcacgtggaaaacagagcggcttaggattagacgtctatgatcag
tacacagggcagaccagggatgtaaaaacattatctggaggagagaaattccatgcctct
ttatgccttgctctgggaatgagcgatgttatccaaagctttcaggggaatattgtgatc
caaacgatgtttatcgatgaaggatttgggtcgctggatgaagagtctctgcggaaggca
attgacgcactgattcagctgcagcaatccggaagaatgattggcatcatttcgcatgtt
caggagctgaaggatgtctttccggcagcaattgaggttcataaaacaaaagagggctgc
agtaaaacggaaatcgtcgtgaaataa
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