Oceanobacillus oncorhynchi: NP440_16315
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Entry
NP440_16315 CDS
T08799
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_16315
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NP440_16315
Archaeal homologous recombinant proteins
NP440_16315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_3
DUF5381
MSC
Motif
Other DBs
NCBI-ProteinID:
UUI38888
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All DBs
Position
complement(3296710..3297876)
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AA seq
388 aa
AA seq
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MKLIHTADWHLGKLVQGVYMTEDQACILDQFVEAVEKESPHAVIIAGDLYDRAVPPVEAV
DLLDKTLDRIVNQLGIPVIAIAGNHDSPGRLHFGSRLMKEKGYHIIGQLSESIQPVVLSD
EFGEVHFHLIPYADPSVVKALFQEKDIRNHQDANAFLVKQIKENMDEAARHVYVGHAFVT
PFGETEENTSDSERPLSIGGAEHVDAHLFTDFHYTALGHLHQAHHVLDEKIRYSGSILKY
SLSEEHHQKGYLVVELGEEGNVQVEKKRLIPKREIRSIKMKMEDIYREPRSEDYVFVQLL
DELPVLSPMEKVRSIFPNAMHVERVRTTSGVTQQKENQAPKTSLSEMELFDAFYQEVTEK
EASEEMNEIMKELFQEIQDADNERKASK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgattcatacagcagattggcatctgggtaagctggttcaaggcgtttatatg
actgaagaccaggcctgcatcctggatcagtttgttgaagcggtggaaaaagaaagtccg
cacgctgttattattgcaggagatttatatgatcgtgcggtacctcctgtagaagcagtt
gatttattagataaaacattagaccggattgttaatcaattaggaattcccgtcatagcg
attgccggtaaccatgacagtccgggcagacttcattttggcagccgcttaatgaaggaa
aaaggttatcatatcattggccagctttcggaaagcatacagcctgttgttctttcagat
gaatttggggaggtgcattttcatcttattccgtatgcagatccaagtgtggtcaaagcc
ttatttcaagaaaaagatattcgtaatcatcaggatgccaatgcttttcttgttaagcag
ataaaggaaaacatggacgaggcagcacgccatgtttatgttggacatgcttttgtaact
ccttttggcgagacggaagaaaatacgagtgattcagaacgcccgctgtctattggcgga
gcagagcatgtcgatgcacatttatttacagattttcattacacagcgttagggcacctc
catcaggcacatcatgtgctggatgaaaaaattcgctactccggctccatcctaaagtat
tccttatcggaagaacatcatcaaaaagggtatttagtagttgaactgggtgaagaagga
aacgtccaggttgagaaaaaaaggcttatccccaaacgtgaaatacgttctatcaaaatg
aaaatggaggatatttatagggagcctcgaagcgaagattatgtatttgtccagctgctt
gacgagcttcctgttttatcgccgatggaaaaggtacgttctatttttccgaatgccatg
catgtggagagagtaagaactacgtcaggagtcacgcaacaaaaagaaaatcaggccccc
aagacgagcttaagtgaaatggaattatttgatgccttttatcaggaagtaacggaaaag
gaagcttccgaagaaatgaacgagataatgaaggagttatttcaagaaattcaggatgca
gataacgaacggaaagcatctaaataa
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