Oceanobacillus oncorhynchi: NP440_16470
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Entry
NP440_16470 CDS
T08799
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03420
Nucleotide excision repair
oon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NP440_16470
03430 Mismatch repair
NP440_16470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_16470
Enzymes [BR:
oon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NP440_16470
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP440_16470
MMR (mismatch excision repair)
Other MMR factors
NP440_16470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
UvrD_C
DEAD
AAA_30
NACHT
SLFN-g3_helicase
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
UUI38917
LinkDB
All DBs
Position
complement(3328419..3330728)
Genome browser
AA seq
769 aa
AA seq
DB search
MDKQRDSHEFEYQRLEKVLDIIDKKQHALKEQSSKVKEDVVELRKTFWDDITVNMDEMDD
IIETQESIKQQSNILAQKERHYGKNYQRMNQLERLKNQPYFGRVDFQEEGSEEIEKIYIG
TSSLMDEEEKDFLIYDWRAPISSIYYDYAPGPVEYRTEEETVNGDMSLKRQYMIRNGKMK
GIFDTSVTIIDEMLQESLSGAADTQMKSIVSTIQQEQNAVIRHRGSKVLVVQGAAGSGKT
SAALQRIAYLLYHHRTNLTADQVLLLSPNDLFSSYVANVLPELGEEPVNQQTFHQFVLKG
TDKALHVDTPFEQIEKLMGLEEEKQKSLRDAIQYFSSTAFMDTINQHLEKLNQTNLVFRS
IRFRNELLIDKTEIEDYFASLEKDMRLPNKMEQLRNWLLQRIRAFQKEEIEKDWVLDQIQ
LLTKDDYMKAYHEAENEHEESSIQDEEKVLREKIIRKTFAPLQNMIRQNRFINTFKMYMD
FIAELNGTSALQQYKAEAIRQLRKKQLPWELATAYNYFKGEMIGHQVNRPVHLIVMDEAQ
DYTPFQFAYLRNLYPYASFTLLGDVNQAIYSYASEENPIQKNISFKESTERIVLTKSYRS
TKPIADFTSYFSPSSEPVEPFERSGSLPEVIHLTKSISEKDALLHKIEEKQQEGHETIAI
IAKTAGACDKIYQQLHKEIDIKQINEHTKTYQKGVVVVPVYLAKGIEFDAVILADASSEV
YSHPTDKYLLYTACTRAMHDLTLLYSDKISPFLSEVPKEKYRYATIVER
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggataagcaaagggatagccacgaatttgaatatcagcgactagagaaggtattagat
attattgataagaaacaacatgctttgaaggaacaatcctccaaggtgaaggaagatgtc
gttgaattacgtaaaacattctgggatgatattaccgttaatatggatgaaatggatgac
attattgagacacaggaaagtattaagcagcaatccaatatcctcgcacagaaagagcgg
cattacgggaaaaattatcagcggatgaaccaattagaacggctgaaaaaccagccttac
tttgggagagttgattttcaggaagaaggcagtgaagaaatcgagaaaatttatattggt
acttcttcgttaatggatgaagaagagaaggattttcttatttatgactggcgggctccg
atttccagtatttattatgactatgctccaggcccggtagagtaccggacggaggaagaa
acagtgaatggcgacatgagcttaaaacgacaatatatgatccggaatggaaaaatgaaa
ggaatctttgacacctccgtaactattatagatgagatgctccaggaaagcttgagcggg
gcggctgatacacaaatgaaatcgattgtttctacgattcagcaagagcaaaatgccgtt
atccgtcatcgcggcagtaaggtgcttgttgtacaaggtgcagcgggaagcggaaaaaca
tctgcagcattacagcgcattgcctatttgctttatcatcatcggactaatttgacagcg
gaccaggtgctgcttttatctccaaatgatttattctcaagctatgtagcaaatgtgctc
cctgaattgggcgaggagccggtcaaccagcaaacctttcatcaattcgttctcaaagga
acagataaagcattacatgtagacaccccctttgaacagattgaaaagctgatggggtta
gaagaagaaaaacagaaatcattaagggatgcaattcagtatttttccagtacggctttt
atggacacaattaatcagcatttagagaaattaaatcaaacaaatcttgttttccgctct
atccgttttcgaaatgaattactcattgataagacggagattgaagattattttgcatcc
ttggagaaggatatgcgtcttccaaataaaatggagcagttaagaaattggctgctgcag
cgcattcgtgcatttcaaaaggaagaaatcgaaaaagattgggttttggatcaaatccag
ctgttaaccaaagatgactatatgaaagcttatcatgaagcagagaatgaacatgaagaa
agcagtatccaggatgaagaaaaggttttgagagagaaaattattcgtaaaacatttgct
ccattgcaaaatatgatccgtcagaaccgttttattaatacatttaaaatgtatatggac
tttatcgcagaattgaatggaaccagtgcgcttcaacaatataaagcagaagcaattagg
cagctccggaaaaaacagcttccatgggaattggcaactgcttataactactttaaaggg
gaaatgattggccaccaggttaaccggcctgtgcatctgattgtaatggatgaggcacag
gattatacgccttttcaatttgcttatttaagaaatctttatccgtatgccagttttaca
ctgcttggggatgtaaatcaggcaatttattcctatgcatcggaggaaaatccgattcag
aagaatatttcgtttaaggaaagtacggagcggatcgtattaacgaaaagctatcgctca
acgaagccgattgcagatttcacatcatacttttcaccgagcagtgaaccggttgaaccc
tttgaacgcagtggttcgcttccagaggtcattcatttgacaaaatccatttctgaaaag
gatgcattgcttcataaaatagaagagaagcagcaggaaggccatgaaacgattgcgatt
atagcgaagacggcaggtgcctgtgataaaatatatcaacagctgcataaagaaatagat
atcaaacagattaatgagcataccaaaacctatcaaaaaggggttgtggttgttcctgtc
tatttagcaaaggggattgaatttgatgcggtgattcttgcagatgcttccagtgaagtg
tattcacaccctacagataaatatttgctttataccgcgtgcacccgtgctatgcatgat
ttgaccttattgtactctgataaaatatctccttttttaagtgaggttcctaaagagaaa
tacaggtatgcgacgattgtggaaaggtga
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