Oceanobacillus oncorhynchi: NP440_16980
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Entry
NP440_16980 CDS
T08799
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oon03000
]
NP440_16980
Transcription factors [BR:
oon03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NP440_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
HTH_10
DUF6262
MarR
HTH_37
Phage_CI_repr
CdhC
ElaD-SseL-like_C
HTH_24
Sigma70_r4
HTH_IclR
SAS4
HTH_AsnC-type
DUF1611_N
Motif
Other DBs
NCBI-ProteinID:
UUI39011
LinkDB
All DBs
Position
complement(3430862..3431191)
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AA seq
109 aa
AA seq
DB search
MIGEKIKQLRQEKRMSLSELAEKAGVAKSYLSSIERDLQSNPSIQFIEKISQVLEVSVKD
LIIENNSIHETELDSEWVNIVKEAMESGVSKEHFREYLEFNKWRQEKGN
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
ttgattggtgaaaaaatcaaacaattacgtcaagaaaagcgaatgtcgctatcagaactg
gctgaaaaggcaggagtagcaaaatcctatttaagttccatcgagcgagaccttcaatca
aacccctccatccaattcatcgagaaaatcagccaagtgttagaggtttctgtgaaagat
ttaataattgaaaacaactcgatacatgaaacagaattagatagtgaatgggtgaatatt
gtaaaagaagcaatggaatctggtgtgtcgaaagagcattttagagaatatctagaattt
aataaatggaggcaggaaaaagggaattaa
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