Oceanobacillus oncorhynchi: NP440_17540
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Entry
NP440_17540 CDS
T08799
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
Organism
oon
Oceanobacillus oncorhynchi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
HTH_3
HTH_17
Sigma70_r4
HTH_20
HTH_38
HTH_23
HTH_32
HTH_IclR
HTH_11
HTH_21
Motif
Other DBs
NCBI-ProteinID:
UUI39115
LinkDB
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Position
complement(3554506..3555801)
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AA seq
431 aa
AA seq
DB search
MQQSLVLKQALAWKMNQSLHQSIEILQLSGIELYDHVQRIAEENPLIEDIRPIDQQVLSQ
FHGETNAFENMNASKKNMYEQLKENVYMLSISEENLKKAVLFGIDSLNENGYLDITMEEW
ASGCQLSMEEIEQALSYLQSLEPPGIGARSLQECIQLQLKEMDCDYPFLEELFENDLVLI
AEEDAQALAEAYGITEEEAGRLISNMKLCHPNPGKLLEEEETEYIIPEAAVLKEKGEWQL
SFFNWSSPTIQLRDDILQADMPKEGADFLKEKKKEIEMLEQAIQYRGKTLEQVLHIIVNK
QLSFFEEGITALKPLTLQEIADVLDLHVSTISRTISNKYLQTSFGILRVKYLLQRESRKG
GGVARVVAKQYVQQIIAEEDQTRPLSDEKIRRKLEELYQVHVARRTVMKYREELGIPSSS
KRKRRTSRNND
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagagtctggtgttaaagcaagcattagcttggaaaatgaatcaatcgcttcat
caatccattgaaatcctgcagctctctggtattgaattatatgatcatgtacaaagaatt
gctgaagagaatcctttgattgaggatatccgtcccattgatcagcaggtgctcagtcaa
tttcatggagagacaaacgcatttgaaaatatgaatgcttcgaaaaaaaatatgtacgag
caattaaaagagaatgtgtacatgctttctatttcggaggaaaatttaaaaaaggcggtt
ctttttggaattgattccttaaatgaaaatggctatctggatattactatggaagagtgg
gcttccggctgtcagttatccatggaagaaatagaacaggctctatcctatttacaatcc
cttgagccgccgggaattggagcccggagcttacaggagtgtatccagctgcaattaaaa
gaaatggattgtgattatccctttttagaggagctttttgaaaatgatttggtcctgata
gccgaggaggatgcccaggctttagctgaagcctacgggattacagaagaggaagctggc
agattaatttcgaatatgaaactttgtcatccgaatccgggtaaattattggaggaagaa
gagacagaatatattattccggaagcggcagtgttgaaggaaaagggagagtggcagctg
tcctttttcaattggtcaagccctactattcagcttcgggatgatatcctgcaggctgat
atgccgaaagagggagcagactttttgaaggagaagaagaaggagatagagatgctggag
caggcgatccaataccgtgggaagaccttggagcaggttttgcatattattgtcaataaa
caattatccttttttgaagaagggataacggcattaaaaccgttaacccttcaggagata
gcggatgtattggatctgcatgtttcaacgatcagccggaccatcagcaataaatatctg
cagacaagttttggtatcctccgagtcaaatatttattgcagcgtgaatcccggaaaggg
ggaggagtcgcccgtgtggttgcgaagcaatatgtacagcaaataattgcggaggaagac
cagacccgcccgctttctgatgaaaaaatccgcaggaaactggaagagctgtatcaggtg
catgtagcaagaagaacggtgatgaaataccgggaagagctgggtattccctcttcctcc
aagcgcaaaaggagaacgagcagaaataatgattaa
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