Oceanobacillus oncorhynchi: NP440_17745
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Entry
NP440_17745 CDS
T08799
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NP440_17745 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_17745 (uvrA)
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NP440_17745 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NP440_17745 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND3
nSTAND1
AAA_21
DnaJ_CXXCXGXG
ATPase_2
AAA_33
AAA_22
AAA_14
AAA_23
NACHT
AAA_25
ATPase
Viral_helicase1
cobW
MeaB
NTPase_1
Septin
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UUI39152
LinkDB
All DBs
Position
complement(3592523..3595396)
Genome browser
AA seq
957 aa
AA seq
DB search
MPSKSIKIQGARAHNLKNIDVDIPKNKLVVLTGLSGSGKSSLAFDTVYAEGQRRYVESLS
AYARQFLGQMDKPDVDVIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLFARVGKP
TCPKHGIEISSQTVQQMVDRVLEYPERTKMQILAPVVSGRKGEHVKVLEDLKKQGYVRVR
IDGDMMEVADDINLEKNKKHSIEVVIDRIVIKSGIESRLSDSLEAALKLGEGNAIVDVID
DEELLFSENHACPICGFSIGKLEPRLFSFNSPFGACPSCDGLGTKLEVDVELVIPDWDKT
LNEHAIAPWEPISSQYYPQLLKSVCDHYGISMDVPVKDIPEEQMDKILYGSGKEKIHFHY
ENDFGSSRTKDVAFEGVLKNVERRYKETSSDFIRETLEKYMAQKNCPTCKGNRLNKEALA
VLIDGKHISQVTDFSILESMDFFKQLELSAKDRQIARLILREIDNRLSFLNNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSALTGVLYVLDEPSIGLHQRDNDRLIETLKQMRDLDNT
LIVVEHDEDTMLAADWLIDIGPGAGEHGGEIVASDTPENVKANENSLTGRYLSGKEFIPV
PSKRKKADKRKIKVTGASENNLKNVSAEIPIGLMTVVTGVSGSGKSTLVNEIIYKSLAKE
LYKGKVKPGKYRSIKGIEHIEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
IRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCDGARYNRETLEVKYKG
KSISDVLEMRIEEALEFFSAIPKIKRKLQTIYDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHKRSNGKTFYILDEPTTGLHSADIRRLLEVLQRLVDNGDSVLIIEHNLDVIKSADHII
DLGPEGGDRGGQIIAKGTPEKIAEQADVSYTGKYLGPVLERDKERMKDMLKEKVSSK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtaaatctataaaaatccaaggtgccagagcgcataacttaaaaaatatcgat
gtggatattcctaaaaataaattagtggttcttacagggctttctggttccgggaaatcc
tcccttgcctttgataccgtttatgcagaaggacagcgcagatacgtagaatcgctgtct
gcctatgcaagacaatttctgggacagatggacaagccggatgtggacgtgattgagggc
ttgtctccggcaatttcgattgaccaaaaaacaaccagcaaaaatccgagatcgacagtc
ggaacagtgaccgagatttatgattatttgcgtttgctttttgcacgcgtagggaagccg
acctgtccgaagcacggtatcgagatcagctcgcagactgtacagcagatggttgaccgg
gttctggaatatccggagagaacgaaaatgcagattttggctccggtcgtatccggcaga
aaaggggaacatgttaaagtattagaggacttgaaaaagcaaggttatgtgcgtgttcga
attgatggcgatatgatggaggttgcggatgatattaatctggagaaaaataaaaagcac
tctatcgaggtggttatcgaccgtattgttattaaaagcggcatcgaaagccggctgagt
gattccctggaagcagcactgaagctgggagaaggcaatgcaatcgtggacgttattgat
gatgaagaattgttattcagtgaaaaccatgcctgtccgatttgcggtttctctatcggg
aaattagagccgcgtttattctcctttaacagcccctttggcgcgtgtccaagctgtgat
gggctgggcaccaagctggaggtcgatgtggaattggttattccggattgggataagacg
ttaaatgagcatgctatcgcaccatgggagccaatcagctcgcagtattacccgcagcta
ttgaaaagcgtctgcgaccattatggcatttcgatggatgttccagtgaaggatatccct
gaggaacaaatggataaaattttatatggaagcgggaaagaaaaaatccactttcattat
gaaaatgattttggcagctcccgtacgaaggatgttgcatttgaaggtgtgttaaagaac
gtagaacgcagatataaagaaacttcttcggattttatccgtgagacattagaaaaatat
atggcgcagaaaaattgtccaacctgtaaagggaaccgtctcaataaagaggcgcttgct
gtattaattgacgggaagcatatcagtcaggtaacagatttttctatcctggaatcaatg
gatttctttaagcagcttgaattgagtgcaaaggaccgtcagattgcacgattgatttta
agagaaatagataaccggctgtcattcttaaataatgtcggcttggattatttaacgctg
tcccgttcagcaggaacactttccggaggggaagcacagcggatccgtctggcgacacaa
atcggttctgcgttgacaggagtgctttatgtgctggatgagccttctatcggactgcat
cagcgggataatgaccgtctgattgaaacactcaaacagatgcgtgatttagataatacg
ctgattgtggtggagcatgatgaagatacgatgcttgcggcggactggctgattgatatc
ggacctggcgccggtgagcatggcggggagattgttgccagtgatacgccggagaatgtg
aaggcaaatgagaattcattaacgggccgttatttatctggaaaagaatttattcctgtg
ccgtcaaaacgtaaaaaagcggataaacgcaaaataaaagttaccggcgcttcggaaaat
aatttaaaaaacgtatcagctgaaattccgattggtctgatgaccgttgtcacaggggtt
tccggttcagggaaaagtacgctggttaatgagatcatttataaatccttagcaaaagaa
ttatataaaggaaaagtaaaaccagggaaatatcgaagcataaaaggcatcgagcatatt
gaaaaagtcattgatatcgaccagtctccaatcgggagaacaccgcgttccaatccggcg
acgtacaccggggtatttgatgatattcgtgatgtgttcgcccagacaaatgaggcgaag
atacgcggctataaaaaaggccgtttcagcttcaacgttaaaggcggacgctgtgaagcc
tgccgcggcgatggaatcatcaagattgaaatgcatttccttcccgatgtgtatgtccct
tgtgaggtttgtgacggagcacgttataaccgggaaacattggaagtgaagtataaaggt
aaaagcatatctgatgttttggaaatgcgtattgaagaagcactggagtttttctctgcg
attccaaaaattaaacggaagctgcaaacgatctatgatgtcggcttaggatatattaag
ttaggtcagccggcaacgacattatccggcggggaagcacagcgtgtgaaattggcgagt
gaattgcataaacgctctaacggaaagacattttatattctggacgagccgacaacagga
cttcactctgccgatatccgccgtctgctggaggttctgcagagacttgtagataatggg
gattctgtcttaattatcgaacacaacctggatgtcatcaaaagtgcggatcatattatt
gatttaggtccggaaggcggagaccgcggcggtcagattatcgcgaagggaacgccggaa
aaaatcgcagaacaggcagatgtttcttatacaggaaagtatcttggccctgtgttagag
cgcgataaggaacgtatgaaggacatgctgaaagagaaagtcagcagtaaatag
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