Oceanobacillus oncorhynchi: NP440_17880
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Entry
NP440_17880 CDS
T08799
Name
(GenBank) response regulator transcription factor
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
oon
Oceanobacillus oncorhynchi
Pathway
oon02020
Two-component system
oon02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NP440_17880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NP440_17880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
oon02022
]
NP440_17880
Two-component system [BR:
oon02022
]
NarL family
DegS-DegU (multicellular behavior control)
NP440_17880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
HTH_40
Sigma70_r4
HTH_29
HTH_38
HTH_24
DUF8040
Motif
Other DBs
NCBI-ProteinID:
UUI39178
LinkDB
All DBs
Position
complement(3622278..3622970)
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AA seq
230 aa
AA seq
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MDAQKEVNIVLIDDHKLFREGVKRILEFEPAFKVVAEADDGTDAANLVRDNNPDVVLMDI
NMPKINGVQATADLLRQFPHTKIIILSIHDDENYVTHALKTGAQGYLLKEMDAEALVEAI
KVVSEGGSYLHPRITHNLVKEYRRLARENTSSLANRHVEHRKPLHLLTRRECQVLQLLAE
GKSNRAVAESLYISEKTVKNHVSNILQKMNVNDRTQAVVCAIRKGWVEVI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacaaaaagaagtaaatatcgtattaattgatgaccacaaattatttcgcgaa
ggtgtcaaacgaattttagaattcgaaccggcatttaaggtagttgcagaagcggatgac
ggaacggatgcagctaatcttgtaagagataataatccggatgttgtgttaatggatatc
aatatgcctaaaattaacggggtacaggcaactgctgacttactgagacaatttccgcat
acaaaaataatcattctgtctatccatgatgatgaaaattatgtgacacatgctttgaaa
acgggggcgcaaggctatctgctaaaagagatggatgcagaagcacttgttgaagcaatt
aaagtagttagcgagggcggttcttatttacatccgcgcattacacataatttagtaaaa
gagtatcgacgtctggcacgggaaaatacttccagtctggcaaacagacatgtagagcac
cgcaagccgcttcatttattgacaagacgtgaatgtcaggtgctgcagctgctggcagag
gggaaaagcaaccgtgctgtagcagagtcgctttatatcagtgaaaaaacagtaaaaaac
catgtaagtaatattcttcaaaaaatgaatgtgaatgatcgtacgcaggctgttgtgtgt
gctatacgaaaaggctgggtagaggttatttaa
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