Oceanobacillus oncorhynchi: NP440_19255
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Entry
NP440_19255 CDS
T08799
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NP440_19255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oon03400
]
NP440_19255
DNA repair and recombination proteins [BR:
oon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NP440_19255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
BACOVA_00961-like
CDC24_OB3
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
UUI39434
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Position
complement(3935603..3936460)
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AA seq
285 aa
AA seq
DB search
MHTMWKGTISFGLVNIPVKMHAATENKDIKLRQLHKKCKMPIKYERTCPNCDKDVKSEDI
VKAYEYAKNKFVILDDEELEALKKEQEDKAVEIVDFVQLEEIDPVYFEKSYYLSPSEGGS
KAYALLREALTDTGKIGIAKMMIRSKEQLAVIRVYKTAIVVETIHYPDEVRGVEDVPNVP
SQESVGKKELDTAKLLIEQLTTEFEPKKYKDNYRTALMELIEAKKNNEEVEIGKDTKEKA
DNVVNLMDALQESLDRAKSDKPKTTKPKKKTTTAKRDAKTKKATS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatgtggaaaggaacaatcagttttggtttggtcaatatccctgtcaaaatg
catgccgctactgaaaataaggatataaaactgcggcagttgcataagaaatgtaagatg
cctattaaatatgaaaggacttgtccaaattgcgataaagatgtaaaaagtgaggatatt
gtaaaagcgtatgaatacgcaaaaaataaatttgttatattggatgacgaagaattagaa
gcactaaagaaagagcaagaagacaaagctgtagagattgttgattttgttcaattggaa
gaaattgatcctgtttattttgagaaaagctattacctatcacctagtgagggcggctca
aaagcatatgcattgctaagagaagcgctaacagatactggtaagattggaattgcaaaa
atgatgatacgctctaaagaacagcttgctgtaatcagagtgtataaaactgcgatagta
gttgaaacaatacattacccggatgaggttcggggagttgaagatgtacccaatgttcct
agtcaagaatcagttggtaaaaaagagctggacactgccaagcttcttatagaacaattg
acgactgagtttgaaccaaaaaaatataaagataattatcgaacagcactcatggaatta
atcgaagccaagaaaaacaatgaagaagttgaaattggtaaagataccaaagaaaaggcg
gataatgtggttaatttaatggatgcgttgcaggaatcgttggatcgtgctaaaagtgat
aagcctaaaacaacgaagccgaaaaagaaaacgactactgccaaaagggatgcaaagaca
aaaaaggctacttcataa
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