Oceanobacillus oncorhynchi: NP440_20070
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Entry
NP440_20070 CDS
T08799
Symbol
spoIIID
Name
(GenBank) sporulation transcriptional regulator SpoIIID
KO
K06283
putative DeoR family transcriptional regulator, stage III sporulation protein D
Organism
oon
Oceanobacillus oncorhynchi
Brite
KEGG Orthology (KO) [BR:
oon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oon03000
]
NP440_20070 (spoIIID)
Transcription factors [BR:
oon03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
NP440_20070 (spoIIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIID
HTH_11
HTH_23
HTH_7
HTH_10
HTH_50
HTH_38
HTH_22
HTH_Tnp_ISL3
HTH_36
HTH_DeoR
HTH_IclR
Sigma70_r4
HTH_29
LacI
HTH_40
MarR_2
Sigma70_r4_2
KORA
TetR_N
GntR
DUF7570
Phage_terminase
HTH_AsnC-type
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
UUI39591
LinkDB
All DBs
Position
complement(4145904..4146233)
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AA seq
109 aa
AA seq
DB search
MHDYIKERTIKIGRHVVETRKTVRTIAKEFGVSKSTVHKDLTERLPEINPKLALEVKEIL
EYHKAIRHLRGGEATRKKYKTPPTEGPLSETKITQTFLSSSSRPKAQGS
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgattacatcaaagaaaggacaattaaaatagggaggcatgttgtagaaaccaga
aaaacagtccgcaccattgcaaaagaatttggcgtatccaaaagtacggtccataaggat
ttaacagagcgcctgccggaaatcaatcccaaactggcactggaagtaaaagaaatttta
gagtatcacaaagccatccgccatttacgcgggggagaagcaacaagaaagaagtataaa
acaccgccaacggaagggccgttatctgaaacaaaaatcacacaaacattcctatcttcc
tccagcaggccaaaagcacaaggaagctag
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integrated database retrieval system
