Orcinus orca (killer whale): 101269526
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Entry
101269526 CDS
T05247
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03040
Spliceosome
oor05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101269526
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101269526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101269526
03041 Spliceosome [BR:
oor03041
]
101269526
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101269526
mRNA cycle factors
Common to processing body (P body) and stress granule
101269526
Spliceosome [BR:
oor03041
]
Common components
Common spliceosomal components
hnRNP proteins
101269526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
101269526
NCBI-ProteinID:
XP_004266244
LinkDB
All DBs
Position
4:complement(105877278..105878651)
Genome browser
AA seq
357 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGQSGSGNFGGGRGGGFGGNDNFGHGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGSNFGGGGSYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPR
NQGGYGGSSSSSSYQWQKVLITARKQSLAGEESQRSDREATSYNRFVNSAKHSGGRA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtcacccaaagagcccgaacagctgcggaagctcttcatcggaggt
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcagtggggaacgctc
acagattgtgtggtaatgagggatccaaacaccaaacgctccagaggcttcgggtttgtc
acatatgccactgtggaggaggtggatgcggccatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagggccgtctcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgttggtggcattaaagaagacactgaagaacatcat
ctaagagattattttgaacagtatgggaaaattgaagtgattgaaatcatgactgaccga
ggcagtggcaaaaagagaggctttgcttttgtaacctttgatgatcatgactctgtagac
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagtaaggaaagcc
ctatctaagcaagagatggctagtgcttcatccagccaaagaggtcaaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactttggtcatggagga
aacttcagcggtcgaggtggctttggtggcagccgcggtggtggtggatatggtggcagt
ggggatggctataatggattcggtaatgatggaagcaattttggaggtggtggaagctac
aacgattttggcagttacaacaatcagtcttcaaattttggacccatgaaaggaggaaac
tttggaggcagaagttctggcccctatggtggtggaggccaatactttgccaaaccccga
aaccaaggtggctatggtggttccagcagcagcagtagctatcagtggcagaaggttttg
attactgccaggaaacaaagcttagcaggagaggagagccagagaagtgacagggaagct
acaagttacaacagatttgtgaactcagccaagcacagtggtggcagggcctag
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