Orcinus orca (killer whale): 101269838
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Entry
101269838 CDS
T05247
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101269838 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101269838 (MYO5C)
04131 Membrane trafficking [BR:
oor04131
]
101269838 (MYO5C)
03029 Mitochondrial biogenesis [BR:
oor03029
]
101269838 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oor04812
]
101269838 (MYO5C)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101269838 (MYO5C)
mRNA cycle factors
P-body specific factors
101269838 (MYO5C)
Membrane trafficking [BR:
oor04131
]
Others
Actin-binding proteins
Myosins
101269838 (MYO5C)
Mitochondrial biogenesis [BR:
oor03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101269838 (MYO5C)
Cytoskeleton proteins [BR:
oor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101269838 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
Rnk_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
101269838
NCBI-ProteinID:
XP_004281714
LinkDB
All DBs
Position
2:105659370..105778014
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGAKVLRLLLEDGTELDYSVDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSTNARVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTIIEGVNDR
ANMIETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQIIAVGNERSAVSEDGSHLEVFCE
LLGLDSVRVAQWLCNRKIITNSETVVKPMTRSQAINARDALAKKIYAQLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDANSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCAHFFQENPVPSSPF
GSAITVKSAKPVIKPNNKHFRSTVGSKFRSSLYLLMETLNATMPHYVRCIKPNDEQLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRFGILMTKQELSFSDKKEVCKVI
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCVVIQKHIRGWLQRRKFLRER
RAALIIQQYFRGQQTVRRAVTATALKEAWAAIIIQKYCRAYLVRSLYQLIRVATITIQAY
TRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLVEKLTSLAALQAGDVEKIQKLESELDRAATHRQNYEEKGKRYKASVEEKLAK
LQKRNSELEIQKEQVQLKLQEKTDELKEKMDNLTKQLFDDVQKEERQRILLEKSFELKTQ
DYEKQIRFLKEEMKALRDEKMQLQHQLEGERVTSDGLKGEVARLSKQAKTISEFEKEIEL
LQTQKIEVEKHVQSQKREMREKVSEITKQLLESYDTEDVRSRLSPEDLEHLNEDGELWFA
YEGLKKATRILESHLQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQIAELEKQKQDLEIRLNEQAENMKGKLEELSNQLNHNQEEEGTQ
RKTIGAPNEMYTKEKEKLMGKIQEMQEASEHLRKQFETESEVKSSFRQEASRLTVEHRDL
EEVLDMKDRVIKKLQDQVKTLTKTIEKANDVHLSSGPKEYLGMLEYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKNNSLRQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIIMENNIQPIIVPGMLEYESLQGICSLKPTGFRKRSSSIDDTDAYTMASILQQLSYFYS
TMCQNGLDPEIVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLARETLEALSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLSSREDSSHLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaacagggtttggattcctgatcctgaagaa
gtttggaagtctgccgaaatagcaaaggactatagagttggtgccaaagtcctgcgtctc
ctgctggaggatggaacggagctggattattctgttgatccagaatctctgcctccactt
cggaatcctgacatcctcgtgggtgagaatgacctcacggccctcagctatctccacgag
cccgctgtgctccacaatctcagaatccgctttgcagaatccaaactcatttacacctac
agtggaatcatcctggtggccatgaatccttacaagcagctgccgatatatggagatgcc
atcatccacgcctacagcgggcagaacatgggcgatatggacccgcacatatttgctgtg
gcagaagaggcatacaagcagatggccagaaataataaaaatcagtcaataattgtaagc
ggggagtccggtgctggaaagacagtatctgctcgctatgccatgaggtactttgccacc
gtcagcaagtccagcactaatgctcgcgtggaagacaaggttctggcgtcgaaccccata
actgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacagaaatcagttttgatgagagaaatcaaattataggagccaacatgagaacttac
ctgctggagaaatccagagttgtctttcaatcagaaaatgagcgaaattaccacattttc
tatcagctttgtgcatctgcacagcagtcggaatttaaacatcttaaattggggagtgca
gaagaatttaattatacgagaatggggggcagtaccatcattgagggcgtgaatgacaga
gccaacatgatagagactcagaagactttcacactactgggtttcaaggaagattttcag
atggatgtttttaagatcctggcagccatcctacatctgggcaacgtgcagatcatagca
gtgggcaacgagagatcggcggtcagtgaggacggcagtcacctggaggtgttctgtgag
ctcctgggcctggacagtgtcagagtcgctcagtggctgtgtaatcgcaaaatcatcaca
aactccgagacggtggtgaaacccatgaccaggtcccaggccatcaacgccagggatgcg
ctggccaaaaagatctacgctcagctgtttgacttcattgtggagagaattaatcaagcc
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgcgaacagctttgaacagttttgcatcaattatgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagagtatatgaaggaagatatt
ccttggactctgatagatttttatgacaaccaaccagttattgacctgattgaagccaaa
atgggtattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaagaactctttgtttgaaaagcccaga
atgtcaaacacatcctttatcatccagcactttgctgataaggtagagtataaatgtgaa
ggtttccttgagaagaacagagacaccgtctatgacatgctggttgaaatcctgagagcc
agcaagtttcatctctgtgcccacttttttcaagaaaatccggttccttcttcacctttc
ggttcagcgatcacagttaaatctgcaaagccagtcatcaagccgaacaacaagcatttc
cggagcaccgtggggagcaagttccgcagctctctgtacttgctcatggagaccctcaat
gccaccatgccccactacgttcgatgcatcaaaccaaatgatgagcaattgccctttgag
tttgactccaaaagaattgttcagcagctgcgagcctgtggtgttttagaaaccattcgc
attagtgcgcagagctacccttctaggtggacgtacatcgagttctacagccgctttggg
atcctcatgaccaagcaggagctttcattcagcgataaaaaggaggtgtgcaaagtgatt
ttacacaggctcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcagggcaagtggcttatttagagaaactccggttggataaactgaggcagggttgt
gttgtgatacaaaagcacatccgtggctggctccagagaagaaaattcctccgagagaga
cgagcggccctgataatccagcagtacttccggggtcagcaaaccgtgaggagagctgtt
accgccacagccttaaaagaagcatgggcagccatcatcattcagaagtactgtcgtgcg
tatcttgtccgcagtttgtaccaactgattcgcgtggccaccatcaccatccaggcctac
acccgaggattcctggcgaggaggaggtatcgaaagatgctggaggaacacaaggctgtg
atccttcagaagtatgcccgggcgtggctggccagacgcagattccaaaatatccgacga
ttcgtactcaacattcagcttacttacagagttcagcgtttgcagaaaaagctagaagac
cagaacagagagaaccatgggctggtggaaaagctgaccagcctggctgctcttcaggcc
ggtgacgtggagaagattcagaaactggaatcagagctggacagagcagccacccacagg
cagaattatgaggagaaggggaagaggtacaaggcttccgtggaagagaaattggcaaag
cttcagaagcgtaattcagaattggaaatacaaaaagagcaagtacagctgaagcttcaa
gagaagactgacgagttgaaagaaaaaatggacaacctcaccaagcagctctttgatgat
gtgcagaaagaagaacgacagagaatacttcttgaaaaaagttttgaactgaaaacgcaa
gactatgagaagcagatccggtttttgaaagaagaaatgaaagctctcagagatgagaag
atgcaactgcagcatcaactggaaggagagcgggtcacctctgatggcctgaaaggggag
gtggcccggctgagcaagcaggcaaagacaatctctgagtttgaaaaggagatagagcta
cttcagacacagaagatagaagtggaaaaacatgtgcagtcccagaaacgagaaatgaga
gaaaaggtgtcggaaatcaccaaacaacttcttgagagctacgacactgaagatgtaaga
agcaggctctctccagaagatctggaacatttaaatgaggatggagaactttggtttgct
tatgaagggctaaagaaagcaacacgcattttggagagccatctccagtcccagaaggat
tgctacgaaaaggagattgaagctctgaacttcaaagtggtgcatctaagtcaggaaatc
aaccacctgcagaaattatttagagaagagaatgacattaatgaaagtatccgtcatgaa
gtcaccaggctaacatcagaaaacatgatgatcccagactttaaacagcaaattgcagaa
ctggagaaacagaagcaagatcttgaaatccgcctgaatgaacaagctgaaaacatgaaa
ggaaaactagaagagttgtctaatcagttgaatcacaatcaggaagaggaaggaacgcaa
agaaaaaccataggagccccaaatgaaatgtataccaaagagaaagagaagctgatgggt
aagattcaagaaatgcaggaggccagcgagcacttgaggaaacaatttgaaactgaaagt
gaagtcaagagtagtttccggcaggaagcatctcgcctcactgtggagcacagggatctt
gaagaagtgttagacatgaaggacagagtgattaaaaagttacaagatcaagtgaagact
ctaaccaagacaattgaaaaagccaatgatgtgcacctgtcctcaggacccaaggagtac
cttggaatgctggaatacaagagagaagacgaggccaagctcatccaaaacctcattctt
gacctgaagccccgcggtgtggtggtgaacatgatccccgggctgccagctcacatcctg
ttcatgtgtgtacgctacgcagactctctaaatgatgccaacatgctcaagtccctcatg
aacagcaccattaatggtatcaagcaggtggttaaggaacatttagaagactttgagatg
ctgtccttttggctttccaatacttgtcatttcctcaattgcctgaagcagtacagtgga
gaagaggaattcatgaagaataacagtctacgtcagaataagaattgcttgaacaatttt
gacctttcagaatacagacagattcttagtgatgtggctatacgaatatatcatcagttc
attattataatggaaaacaatattcaaccaataatagtgccaggcatgctggagtatgag
agtctgcagggcatttgcagcctgaagcccacaggcttccggaagcggtcatccagcata
gatgacacggatgcctacacaatggcctccatcctgcagcagctgagctacttttacagt
accatgtgccagaacggcctggaccctgagatcgtgaggcaggcagtgaagcagctcttc
ttcttgattggggcggtcaccctgaacagcctcttcctgcgcaaggacatgtgctcttgc
agaaaagggatgcagataaggtgcaacatcagctacttagaagaatggcttaaagataag
aatttgcagaacagcttggccagggaaaccttggaagctctctctcaggcagcctggttg
cttcaggtcaagaagaccacagacagcgatgccaaggagatctacgaacgctgtacctcc
ctgtctgctgtgcagatcataaagatccttaactcatacacacctatagatgacttcgag
aaaagagtgactccatcctttgttcgcaaagtacaggctctcctcagtagccgagaggat
tcatcacacctgatgttggataccaagtatctctttcaagtcacatttccttttaccccc
tctccacatgctctggaaatgatccagatccccagcagtttcaaactaggctttctcaat
agattatag
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integrated database retrieval system
