Orcinus orca (killer whale): 101270061
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Entry
101270061 CDS
T05247
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03022
Basal transcription factors
oor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101270061 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
101270061 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101270061 (ERCC3)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101270061 (ERCC3)
Enzymes [BR:
oor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101270061 (ERCC3)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101270061 (ERCC3)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101270061 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
101270061
NCBI-ProteinID:
XP_004276907
LinkDB
All DBs
Position
7:11640763..11677921
Genome browser
AA seq
782 aa
AA seq
DB search
MGKRDRADREKKKSKKRHYEDEEDDEDDAPGNDSQEAVPSAAGKQVDESSTKVDEYGAKD
YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPMIRECRLRNSEGEATELITETFTSKSAIAKSAEGSGGPSTSRVTDPQG
KSDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINVDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLANMEEEELAFSTKEEQQQLLQKVLAAS
DLDAEEEVVAGELGSKSSQVSRRFGTMSSMSGADDTVYMEYHSSRSKASTKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagggaccgggcggaccgcgagaagaagaagtccaagaagcggcactacgag
gatgaggaagacgatgaagacgacgcccctgggaacgactctcaggaagcggttccctcg
gcggccgggaagcaggtggatgagtccagcaccaaagtggatgagtatggagccaaggac
tacaggctgcagatgccgctgaaggacgaccacacctccaggcccctctgggtggctcct
gatggccacatcttcttagaagccttctctccagtttacaaatatgctcaagacttcctg
gtggctattgcagagccggtgtgccgaccaacccacgtgcacgagtacaaactaactgcc
tactccctgtacgcggctgtcagcgttgggctgcaaactagtgacatcactgagtacctc
aggaagctcagcaagacgggagtccctgatggaattattcagtttattaagttatgtact
gtcagctatgggaaagtcaagctggtcctgaagcacaacaggtactttgttgaaagttct
caccctgatgtcatccagcatcttctccaggatcccatgatccgggaatgccgcctgagg
aactctgagggggaggcaaccgagctcatcacagagactttcacaagcaaatctgctatc
gctaagagtgctgagggcagcggtgggccatccacttcccgggtgacagatccacagggt
aaatctgacatccccacggacctctttgacttttatgagcaaatggacaaggatgaggag
gaagaagaagagacacagacagtatcttttgaagtcaagcaggaaatgattgaggaactc
cagaaacgttgcatccacctggagtaccctctgttagcagaatacgacttccggaatgat
tctgtcaaccctgacatcaacgttgacctgaaacccacagctgtccttagaccttatcag
gagaagagcttgcggaagatgtttgggaatgggcgtgcacgttccggggtcatcgtcctt
ccttgtggtgctgggaagtccttggttggcgtgacagctgcgtgcacagtcagaaaacgc
tgcctggtgctgggcaactcagctgtgtctgtggagcagtggaaagcccagtttaagatg
tggtccaccatcgacgacagccagatctgccgctttacctccgacgccaaggacaagccc
ataggctgctccattgccatcagcacctactccatgctgggccacaccaccaaaaggtcc
tgggaggccgagcgggtgatggagtggctcaaaactcaggagtggggcctcatgatcctg
gacgaagtacacaccataccagccaagatgttccgacgggtgctcaccattgtgcaggcc
cactgcaaactgggcttgactgcaaccctcgtccgggaagatgacaaaattgtcgactta
aattttctgattgggcccaagctctatgaagccaactggatggagctgcagaacaacggc
tacatcgccaaagtccagtgcgctgaggtttggtgcccgatgtctcctgagttttaccgg
gagtatgtggcaatcaaaaccaagaaacgaatcttgctgtacaccatgaaccccaacaaa
ttcagagcttgccagtttctgatcaagtttcatgaaaggaggaatgacaagattattgtt
tttgctgacaacgtgtttgctctgaaggaatatgccattcgactgaacaaaccctatatc
tatggtcctacatcccagggagaaaggatgcagattctccagaatttcaagcataacccc
aaaatcaacaccatcttcatatccaaggtgggtgacacatcgtttgatctgccagaagca
aatgttctcattcagatctcatctcatggtggctcccggcggcaggaggcccagaggctg
gggcgagtgctccgagcaaaaaaagggatggttgcagaggagtacaatgccttcttctac
tcgctggtgtcccaggacacacaggaaatggcttactcaaccaagcgacagaggttcttg
gtagatcaaggttatagctttaaggtgatcacaaagcttgccaacatggaggaggaggag
ttggcgttttcaacaaaagaggagcaacagcagctcttacagaaggtcctggcagcctct
gacctggatgctgaggaggaggtggtggcgggagaacttggctccaaatccagccaggtg
tctcggcgcttcggcacgatgagctctatgtctggggccgatgacacagtgtacatggag
taccactcgtcacggagcaaggcttccactaagcacgtgcacccacttttcaagcgcttc
aggaaatga
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