Orcinus orca (killer whale): 101270123
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Entry
101270123 CDS
T05247
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04060
Cytokine-cytokine receptor interaction
oor04061
Viral protein interaction with cytokine and cytokine receptor
oor04064
NF-kappa B signaling pathway
oor04668
TNF signaling pathway
oor04940
Type I diabetes mellitus
oor05166
Human T-cell leukemia virus 1 infection
oor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101270123 (LTA)
04668 TNF signaling pathway
101270123 (LTA)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101270123 (LTA)
04061 Viral protein interaction with cytokine and cytokine receptor
101270123 (LTA)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101270123 (LTA)
05168 Herpes simplex virus 1 infection
101270123 (LTA)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
101270123 (LTA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oor04052
]
101270123 (LTA)
Cytokines and neuropeptides [BR:
oor04052
]
Cytokines
Tumor necrosis fators
101270123 (LTA)
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Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
101270123
NCBI-ProteinID:
XP_004286659
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Position
10:complement(82786288..82790725)
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AA seq
205 aa
AA seq
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MTPPGRLYLLRVCSTPLLLLLLGLLLALPPEAQGLSGVGLPPSTAQPAHQHPPNHFTRGT
FKPAAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGEGC
FPKATPTPLYLAHEVQLFSSQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQ
LSTHTDGISHLLLSPSSVFFGAFAL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacctggacgtctctacctcctgagggtgtgcagcacccccctactcctcctc
cttctgggactgctgctggccctgccgcccgaggcccaggggctctctggtgttggcctc
ccaccctcaactgcacagcctgcccatcagcaccccccgaatcacttcacccgaggcacc
ttcaaacctgctgctcaccttgttggagaccccagcacccaggactcactgcgctggaga
gcgaacacggatcgcgccttcctccgccacggcttctctctgagcaacaattccctcctg
gtccccaccagtggcctctacttcgtctactcccaggtggtcttctctggggaaggctgc
ttccccaaggccacccccacccctctctacctggcccacgaggtccagctcttctcctcc
cagtacccattccacgtgcctctcctcagcgctcagaagtccgtgtgcccagggccacag
ggaccttgggtgcgctcggtgtaccagggggctgtgttcctgctcacccggggagaccag
ctatccactcacacagatggcatctcccacctgctcctcagccccagtagcgtcttcttc
ggagccttcgctctatag
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