Orcinus orca (killer whale): 101270497
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Entry
101270497 CDS
T05247
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101270497 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101270497 (EXOSC7)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101270497 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
101270497 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101270497
NCBI-ProteinID:
XP_004283882
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All DBs
Position
10:complement(42260750..42290132)
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AA seq
291 aa
AA seq
DB search
MAFVALSEAEKVYIVHGVQEDLRTDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LKSLCISPREHCWILYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGLKDI
ELSDDPYDCIQLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESVFEMMETSKRVGKVLHTSLQSVLHKEESLGPKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtggcgctgagtgaggcggagaaggtgtacattgtgcatggcgttcaggaa
gacctccgcacggatggccgtggctgtgaagactaccgatgtgttgaagtggaaactgac
gtggtgtccaacaccagtgggtctgccagagtcaagctgggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacgccgaagctggagaaaccaaatgaaggttacctggag
ttctttgttgactgttcagccaatgctacccctgaatttgaaggtcggggaggtgatgac
cttggcacagagattgctaacaccctctaccggatatttaacaacaagagcagcgtcgac
ctgaagtccctgtgcattagtcctcgggagcattgctggattctctacgtggatgtgcta
ctcctggaatgtggtggaaatttgtttgatgccatctccattgctgtaaaggctgcgctc
ttcaatacaaggataccaagagttcgtgttctggaagatgaagagggcttgaaggacatt
gaactgtctgacgacccctatgactgcatccagctaagtgtggagaatgtcccctgtatc
gtcaccctgtgcaaaattggttatcggcacgtggtggatgctactcttcaggaggaggcc
tgctccttggccagcttgctggtgtccgtgaccagcaagggagttgtgacatgcatgagg
aaagtgggaaagggcagcctggacccagagagcgtcttcgagatgatggagaccagcaag
cgcgtgggcaaggtgctgcacacctccctgcagagcgttctacacaaggaggaaagcctg
gggcccaagagacagaaagttggattcctgggatga
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