Orcinus orca (killer whale): 101270507
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Entry
101270507 CDS
T05247
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X2
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04140
Autophagy - animal
oor04148
Efferocytosis
oor05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101270507 (VPS16)
04148 Efferocytosis
101270507 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101270507 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101270507 (VPS16)
Membrane trafficking [BR:
oor04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101270507 (VPS16)
Hops complex
101270507 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
101270507
NCBI-ProteinID:
XP_004285368
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Position
16:30134139..30155643
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AA seq
839 aa
AA seq
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MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELSDCLVAAAPYGGPIALLRNPGRKEKPA
SARPVLEIYSASGVPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTMCQDRVAHILLAVGPDLYLLDHAACSAVTPPGLAAGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPEGIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLPQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPNNFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHVRASYAAEERIEGRVAALQMAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSVHDTVTTLILSGQNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAEMSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacaccgcgaactggaacccgcttggggactctgccttttaccggaaatat
gagctgtatagcatggactgggacctgaaggaagaactgagcgactgcctggtggccgct
gcgccctatgggggccccattgcgctgctgaggaaccccgggcggaaggagaagcctgcc
agcgcacggccagttcttgagatctactcagcttctggtgtgcctctggccagtctgctg
tggaagagtgggcccgtggtgtccctgggctggtcagctgaggaggagctgctctgtgtg
caggaagacggggtcgtgctggtttatgggcttcatggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgggttctagatgcccggatcttccatactgagttt
ggttctggggtggccatcctcacaggggcccaccgcttcaccctcagtgccaacgtgggc
gacctcaaactccgccggatgccagaggtgccaggtctgcagagtgcaccatcatgctgg
accacaatgtgccaggaccgagtggcacacattcttctggctgtaggacctgatctttac
ctcctggatcacgcagcctgctctgcagtgacaccccctggcctagccgcaggagtgagc
agcttcctgcagatggctgtctccttcacctacagacacctggcgctcttcacagacaca
gggtacatctggatggggacagcgtctctcaaggagaagctgtgtgagttcaactgcaac
atccgggctcccccgaagcagatggtctggtgcagccgtcctcgcagcaaggagagggcc
gttgtggtagcctgggagaggcggctaatggtggtgggcgacgcacctgagggcatccag
tttgtgctggatgaggactcctacctggtgcctgagctggatggggtccgcatcttctcc
cgcagtacccatgagttcttgcacgaggttccagtggccagcgaggagatctttaaaatt
gcctcaatggcccctggagcgctactgttggaggcccagaaggaatatgagaaagagagc
cagaaggcggatgagtacctacgggagatccaggagctggggcagctgccccaggccgtg
cagcagtgcatcgaggccgcgggacatgagcactggccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctggacagatttccacccaacaactttgtgcgc
atgtgtcaggaccttcgtgtactcaatgccattcgggactatcacatcgggattcccctc
acctatagccaatacaagcagctcaccatccaggtgctgctggacaggcttgtgttgcgg
aggctttaccccctggccattcagatatgtgagtacctgcggcttcctgaagtgcagggc
gtcagcagaatcctggcccactgggcctgctacaaggtacaacagaaggacgtgtctgac
gaggatgttgctcgtgccattaaccagaagctgggggacacacctggtgtctcttactct
gacattgctgcacgagcctatggctgtggccgcacggagctggccatcaagctgctggaa
tatgagccacgctctggggaacaggttccccttctcctaaagatgaagaggagcaaactg
gcgctaagcaaggccatcgagagtggggatactgacctggtgttcacggtgctgctgcac
ctgaagaatgagctgaaccgaggagactttttcatgacgcttcggaaccagcccatggcc
ttaagtttgtaccgacagttctgtaagcatcaagagctagagacgctgaaggacctttac
aatcaggatgacaaccaccaggagctgggcagcttccacgtccgagccagctacgctgca
gaggagcgtattgaggggcgagtcgcagctctgcagatggcagccgacgcattctacaag
gccaagaatgagttcgcagccaaggccacagaggatcaaatgcggctcctacggctgcag
cgacgcctagaagatgagctggggggccggttcttagacctgtctgtacacgacacggtc
accaccctcatcctcagcggccaaaacaagcgtgcggagcagctggcacgtgacttccgc
atccctgacaagaggctctggtggctgaagctgaccgccctagcagatctggaagactgg
gaggagctagagaagttttctaagagcaagaaatcacccatcggctacctgccctttgtg
gaaatctgcatgaaacaacacaacaaatatgaagccaaaaagtatgcttcccgcgtgggt
cccgagcagaaggtcaaggccttgcttctcgttggggacgtggctcaggctgcagacgtt
gccatcgagcaccggaatgaggcagagatgagcctcgtattgtcccactgcactggagcc
acagatggggccacggctgacaagattcagcgggcccgggctcaagcccagaagaagtga
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