Orcinus orca (killer whale): 101270616
Help
Entry
101270616 CDS
T05247
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X4
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101270616 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oor03019
]
101270616 (FIP1L1)
Messenger RNA biogenesis [BR:
oor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101270616 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101270616
NCBI-ProteinID:
XP_004268318
LinkDB
All DBs
Position
4:complement(81736046..81800747)
Genome browser
AA seq
594 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASKKANSSVGKWQDQYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRS
ARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRERDRDRDRERE
RTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETR
HKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEATPAE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaaccct
ccatcgggaattgaagatgaaactcctgaaaatggcgtacctaaaccgaaagtgacagag
actgaagacgatagtgatagcgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaagacaggaggaagagtttatggaactacaggaacgaaagtcaaaggagtagat
cttgatgcacctggaagcattaatggagtgccccttttggaggtagatttggattctttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggactggaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaaacagcgcttccatctacaaaagctgagtttacttctcct
ccttctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccaaaaaagccaattcaagcgttgggaagtggcaggatcaatatggg
agggccgaatcacctgatctaaggagattacctggggcaattgatgttattggtcagact
ataactatcagccgagtagaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccaccgccatttttc
cctccaggagctcctcccactcaccttccacctcctccatttcttccacctcctcccact
gtcagcactgctccacctctgattccaccaccaggttttcctcctccaccaggcgctcca
cctccgtctcttataccaacaatagaaagtggacattcctctggttatgatagtcgttct
gcacgtgcttttccatatggcaatgttgcctttccccaccttcctggttctgctccttca
tggcctagtcttgtggacaccagtaagcaatgggactattactcaagaagagagaaagac
cgagatagagacagagacagagaccgagaacgagatcgtgatcgagacagagaaagagaa
cgcaccagagagagagagagggagcgtgatcatagtcccacgccgagtgttttcaacagt
gatgaagaacgatacagatacagggagtatgcagaaagaggctatgagcgccacagagca
agtcgggagaaagaagaacgacacagagaaagacgacacagagagaaagaggaaaccaga
cacaagtcctctcgaagtaatagtagacgtcgccatgaaagtgaagaaggagacagtcat
aggagacacaagcacaaaaaatctaaaagaagcaaagaaggaaaagaagctggcagcgaa
cctgcccctgaacaggagagcaccgaagctacacctgcagaatag
DBGET
integrated database retrieval system
