Orcinus orca (killer whale): 101270874
Help
Entry
101270874 CDS
T05247
Symbol
SRSF1
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03040
Spliceosome
oor04657
IL-17 signaling pathway
oor05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101270874 (SRSF1)
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
101270874 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101270874 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oor03041
]
101270874 (SRSF1)
Spliceosome [BR:
oor03041
]
Common components
Common spliceosomal components
SR proteins
101270874 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
DDE_Tnp_1
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
101270874
NCBI-ProteinID:
XP_004271828
LinkDB
All DBs
Position
19:52017557..52021327
Genome browser
AA seq
248 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtggtgtgattcgtgggccggcagggaacaacgactgccgcatctacgtg
gggaacttacctccagacatccgaaccaaggacattgaggacgtgttctacaaatacggt
gctatccgcgacatcgatctgaagaaccgccgcggaggaccgcccttcgccttcgttgag
ttcgaggacccgcgggatgcggaagacgcggtgtatggtcgcgacggctacgattacgat
ggataccgtctgcgggtggagtttcctcgaagcggccgtggtacaggccgaggcggcggc
gggggtggaggtggcggggctccccgaggccgctatggtcccccgtccaggcgctctgaa
aacagagtggttgtctctggactgcctccaagtggaagctggcaggatttgaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gagtttgtacggaaagaagatatgacctatgcagttcgaaaactggataacactaagttt
agatctcatgagggagaaactgcctacatccgggttaaagttgatgggcccagaagtcca
agttatggaagatctcgatctcgaagccgtagtcgtagcagaagccgtagcagaagcaac
agcaggagtcgcagttattccccaaggagaagcagaggatcaccacgctattctccccgt
catagcagatctcgctctcgtacataa
DBGET
integrated database retrieval system
