Orcinus orca (killer whale): 101270939
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Entry
101270939 CDS
T05247
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101270939 (PARPBP)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101270939 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
101270939 (PARPBP)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
UvrD_C
MethyTransf_Reg
Motif
Other DBs
NCBI-GeneID:
101270939
NCBI-ProteinID:
XP_004269506
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All DBs
Position
11:83543139..83631818
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AA seq
580 aa
AA seq
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MAVLNQKSVLDMIKEFRRNWHTFCNSERTTVCGADSMLLALQLSMAENNKQYSGEFTVSL
SDVLLTWKYLLHEKLNLPVENMKVIDHYENIRKIYDDFLKNSNMLDMIDVYKKCNVLTSN
YENYANISPSQLRDFLSGRQYAVDNETDFSEPMSPISKRNRDNEKVQLLAKKIIYSYLNL
LVNSKNDLALAHILNIPDRGLGREAFTDLKHAAREKQMSIFLVATSFIRTIELGGKGYAP
SPSDPLRTHIKGLSNFINFIDKLDEILGEIPNPSIAGGRILSVIKMQLIKGQNSRDPFYK
AIEEVAQDLDLRIKSIINSQQGDLALSTTDISPARPKSHAINHGTAYCGRDTVKTLLVLL
DEEAASAPTKNKAELLYDDENTIHHNGTSILTLFRSPTQVNNSSMKPLRERIHMSVQEKT
IKMKQTLIRSQFACTYKDDCMISKDKWNSVNSASKPLCVLHMENDLSGGVNSSVGRPTIG
TSSGNVHLDRSKNEKVARKSISLTGNKGSKRKQVDLDDENILCDNGNEPPQHKNVKIPKA
SKDLQSKLDGKLVRAAKSNNCTAKNKLITGQTKLTQFFRL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcttaatcagaagtctgtcttggatatgattaaagagttcagaaggaattgg
cacactttttgtaactctgagagaactactgtatgtggtgcagactccatgctcttggca
ttgcagctttccatggcagagaacaacaaacagtacagtggagaatttacagtctctctc
agcgatgtcttattgacctggaaatacttactacatgagaaattgaacttaccagttgaa
aatatgaaagtgattgaccattatgagaacattaggaagatttatgatgatttcttaaag
aatagtaacatgttagatatgatcgatgtttataaaaaatgtaatgttttgacttcaaat
tatgaaaattatgccaacatatctcctagtcaactacgggattttctgtctggcagacag
tatgcagtagataatgaaactgatttttctgaaccaatgtcaccaattagtaaacgcaac
cgggataatgaaaaggtacagttactagcaaagaaaattatctactcatatttaaacctg
ctggtgaattcaaagaacgacttggctctggctcatattctcaatattcctgatagagga
cttggaagagaagccttcactgatttgaaacatgctgctcgagagaaacagatgtctatc
tttttggtggctacatcatttattagaacaatagagcttggagggaaaggatatgcacca
tcaccatctgatcctttaaggacacatataaaaggattgtctaattttattaatttcatt
gacaaattagatgaaattcttggagaaataccaaatccaagtattgcagggggtcggata
ctctcagtgataaagatgcagctgattaaaggccagaacagcagggatcctttttataaa
gcaatagaggaagttgctcaagatttggatttgaggattaaaagtattatcaattctcaa
caaggagacttagctcttagtaccactgacatcagtcctgcacggccaaaatctcatgcc
ataaaccatggcactgcatactgtggcagagatactgtgaaaactttactagttcttttg
gatgaagaagcagccagtgctcctaccaaaaacaaagcagagcttttatatgacgatgaa
aacacaattcatcataatggaacttctattcttacactttttagatctcccacacaagtg
aataattcatcgatgaaacccctaagggaacgtatccatatgtcagtgcaagagaaaaca
attaagatgaagcaaaccttaattagatctcagtttgcttgtacttacaaagatgactgc
atgataagcaaggataagtggaatagtgttaattcagcatcaaagcctttgtgtgttctt
cacatggaaaatgacctttctggaggtgtaaattcatctgttggaagaccaacaattgga
acaagttctggaaatgttcatctggacagaagtaaaaatgaaaaagtggcaagaaaatca
attagtctgacaggaaataaaggctcaaaaaggaaacaggtggatttggatgatgaaaat
attctctgtgataatggaaacgaaccacctcaacacaaaaatgttaagatacctaaggca
tcaaaagatttgcagagtaaattagatggcaaactagttagagctgcaaaaagcaacaac
tgtactgccaagaacaaattgattactggccagacaaagttaactcagttttttagacta
tga
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