Orcinus orca (killer whale): 101271010
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Entry
101271010 CDS
T05247
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101271010 (MMS19)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101271010 (MMS19)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101271010 (MMS19)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
101271010 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT
HEAT_EZ
INTS7_N
Motif
Other DBs
NCBI-GeneID:
101271010
NCBI-ProteinID:
XP_012388010
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All DBs
Position
14:complement(60445978..60478133)
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AA seq
1029 aa
AA seq
DB search
MAAAAALEAVAPTGALWGLVQDFVMGQQEGPADQVAADVKSGSYTVLQVVEALGSSLENP
EPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLCV
ALPPGLAVSVLKAIFQEVHVQSLPQVDRHTVYSIITNFMRTREEELKGLGADFTFGFIQV
MDGEKDPRNLLVAFRIVHDLISRDYSLGPFVEELFEVTSCYFPIDFTPPPNDPHGIQRED
LILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLPS
LWASIRREVFQTASERVEAEGLAALNSLTACLSRSVLRADAEDLLDSFLSNILQDCRHHL
CEPDMKLVWPSAKLLQAAAGASARACDHITSNVLPLLLEQFHKHSQSNQRRTILEMILGF
LKLQQKWSYEDKDERPLSDFKDQLCSLVFMALTDPSTQLHLVGIRTLTVLGAQPDLLSSG
DLELAVGHLYRLSFLEEDSQSWVAALEASGTLATLYPVAFSSHLVPKLAGELCIEESDLA
RGDGPTKCSRHRRCLQALSAISTHASIVKETLPLLLQHLRQMNKGNTVAGTSEVIAVCQS
LQQVAEKCQQDPESCWYFHQTAIPCLLALAVQASMPEKEHSVLKKVLLQDEVLAAMVSVI
GTATTHLSPDLAAQSVAHIVPLFLDGNITFLPENNFPGRFQPFQDGSSGQRRLVALLMAF
VCSLPRNVEIPQLNQLMRELLELSCCHSCPFSSTAAAKCFAGLLNKHPAGQQLDEFLQLA
VDKVEAGLSSGPYRSQAFTLLLWVTKALVLRYHPLSSCLTDRLMGLLSDPELGPAAADGF
SLLMSDCTDVLTRAGHAEVRIMFRQRFFTDNVPALVRGFHAAPRDVKPNYLKGLSHVLNR
LPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQVMSLHVDTLVTKFLN
LSSSPSMAVRIAALQCMHAVTHLPTPVLLPYKLQVIRALAKPLDDKKRLVRKEAVSARGE
WFLLGSPGS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgctctggaggcggtggcgcctacgggcgccctgtggggcctcgtg
caagacttcgtcatgggtcagcaggagggccccgctgaccaagtggctgcagatgtgaaa
tctggaagctatacggtgttacaagtggtggaagcccttgggtcctctctagagaatcca
gaaccccgaactcgggcacgaggaatccagctcttgtcacaggtgctactgcagtgtcac
tccttgctcctggagaaggaagtggtacacttgatcctattctatgagaaccggctgaag
gaccatcatcttgtgatcccgtctgtcctgcagggtttgagggcacttagcctgtgtgtg
gccctgcccccagggctggctgtctccgtgcttaaagccatcttccaggaggtccacgta
cagtccctgccacaggtggaccgacacacagtctacagtatcatcaccaacttcatgcga
acccgggaagaagagctgaagggcctaggagctgatttcacctttggcttcatccaggtg
atggatggggaaaaggatccccgtaatcttctggtggccttccgcatcgtccatgacctc
atctccagagactatagcctgggaccctttgtggaggagttgtttgaagtgacatcctgt
tacttccctattgattttacccctccacctaatgatccccatggtatccagagagaagat
ctcatcctgagtcttcgagctgtgctggcttctacaccgcgatttgctgagttcctgctc
cccctgctgattgagaaagtggattccgagattctgagtgccaagctggattctctgcag
actctgaatgcttgctgtgctgtgtacggacagaaagaactaaaggacttcctccccagc
ctttgggcttctatccgcagagaggtgttccagacggcaagtgagcgggtagaggccgag
ggcctggcagcccttaactccctgactgcgtgtttgtctcgctctgtgctgagggctgat
gctgaggacctccttgactccttccttagcaacattctacaggactgcaggcaccatctg
tgtgaaccagacatgaaactggtgtggcctagtgccaaactgttgcaggcggctgcaggt
gcgtctgcccgggcctgtgaccacatcaccagcaacgtgctgcccctactgctggaacag
ttccacaagcacagtcagagcaaccagcggcggacaatccttgaaatgatcctgggtttc
ttgaagctgcaacagaaatggagctatgaagacaaggatgaaaggcctctgagtgacttc
aaggaccagctgtgctcactggtattcatggccctgacggaccccagcacccagcttcac
cttgttggcatccgtacactcacagtcttgggtgcccagccagatctcctgtcttctggg
gacttggagctggcagtgggtcatctatacagactgagcttcctggaggaggattcccag
agttgggtggcagcactggaagcatcaggaaccctggccactctctaccctgtggccttc
agcagccacctagtgcccaagcttgctggggagctgtgtatagaggagtcagatttggct
agaggagatgggcccaccaaatgctcccggcatcggcgctgtctgcaagccttgtcagct
atatccacacatgccagtattgtcaaggagaccctgcctcttctgctgcagcatctccgc
cagatgaacaaagggaatacggttgcaggaacaagtgaagttattgctgtctgtcagagt
ctccagcaggtggcagaaaaatgccagcaagaccccgagagctgctggtatttccaccag
acagctataccttgcctgcttgccttggctgtgcaggcttccatgccagagaaggagcac
tcagttctgaagaaagtgctgttgcaggatgaggtcttggccgccatggtgtctgtcatt
ggcactgccaccacccacttgagccctgacttggctgcccagagtgtcgcccacattgtg
cccctcttcttggatggcaacatcaccttcctgcctgaaaacaacttccctggcagattc
caaccattccaggatggctcctcagggcagaggcggctggttgcactgcttatggccttt
gtctgctccctgcctcgaaatgtggaaatccctcagctgaaccaactcatgcgggaactt
ttagagctgagctgctgccacagctgccccttctcctccactgctgctgccaagtgcttt
gcaggacttctgaacaagcatcctgcagggcaacagctggatgaattcctacagctggct
gtggacaaagtggaggctgggctgagctctgggccctatcgtagtcaggccttcacactg
cttctctgggtcacaaaggccctagtgctcagatatcatcctctcagctcctgccttaca
gaccggctcatgggcctcctgagtgatccagaactaggcccagcagcagctgatggcttc
tctctgctcatgtctgactgcactgatgtgctgactcgtgctggccatgctgaagtgcgg
atcatgtttcgccagcggttcttcacagataacgtgcctgctttggtccggggtttccat
gctgctcctcgagatgtgaagccaaattacctgaagggtctgtctcatgtacttaacagg
ctgccaaagcctgtgctcttgccggagctgcccacgctgctttccttgctgctggaggcc
ctgtcctgcccagactctgtggtacagctctccaccctcagctgccttcagcctcttcta
ctggaagcaccccaagtaatgagtcttcacgttgacaccctcgtcaccaagttcctaaac
ctcagctccagcccttccatggctgtccggatcgctgcactgcagtgtatgcacgctgtt
actcacctgcccacccccgtgctgctgccgtacaaactgcaggtgatccgggccttagcc
aaacccctggatgacaagaagagactggtgcgtaaggaagcagtgtcagccaggggagaa
tggtttctgctggggagccctggcagctga
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