Orcinus orca (killer whale): 101271029
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Entry
101271029 CDS
T05247
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03250
Viral life cycle - HIV-1
oor04623
Cytosolic DNA-sensing pathway
oor05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101271029 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101271029 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101271029 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oor03400
]
101271029 (SAMHD1)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101271029 (SAMHD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
101271029
NCBI-ProteinID:
XP_004273026
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Position
16:23127896..23191002
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AA seq
628 aa
AA seq
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MQSADSQKPPKRPRRDGSPRTPPNTPPADTERSPSPDLHPDHRTWGPEQVCSFLRDCGFS
DSGLLERCREKKITGSILPFLDESLLEDLGISSYGKRIKLLNNIQQLDQTHVYTMKVIND
PIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGRLVR
ELSEKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVKWTHEQGSVMM
FEHLVNSNGLRDVMEQYGLIPEEDIWFIKEQITGPPESPIKDSSKWLYKGRPKEKSFLYE
IVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDDRKHICTREKEVGNL
YDMFHTRNSLHRRAYQHKVGNIIDTMITDAFLEADPYIEITGSEGKKYHISTAIDDMEAF
TKLTDNIFLEILYSADPKLDAARAILKKIECRNLYKFVGETQPIGQIKIKRENYESLPKG
VASAKPSDMVLEPELKAEDFIVDVINMDYGMEDKNPIDHVRFYCKSEPSQAIMITKNQVS
QFLPEVFAEQLIRVYCKKTDKRSLYAAQQHFVQWCLINDFTKPQDGDIVAPLITPRKSEW
NYTDSAQSPAHTREASKCRAQLFRDGSV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgccgactcgcagaagccccccaagcggccccggcgcgatggcagcccgaga
accccgccaaacacccctcccgcagacacagagaggtccccgagccccgaccttcacccc
gaccaccggacctggggcccggagcaggtgtgctccttcctaagggactgtggcttcagc
gattctggactgctggaacgctgccgagagaagaaaatcacaggttcaatactgcccttt
cttgatgagtctcttcttgaagaccttggaataagttcctatgggaagagaataaagctg
cttaataatatccaacaactggatcaaactcatgtttatacaatgaaggtgattaatgat
cctatccatggtcacattgaatttcaccctcttctcatccgaatcatcgacacacctcaa
tttcagcgcctgcgatatattaagcagttgggaggcggttactatgtttttccaggagct
tcacacaatcgatttgagcatagtctaggcgtagggtatctagcaggacgtctagttcgt
gaactgagtgaaaaacaaccagagctgcagataagtgaacgagatatgctctgtgttcag
atcgctggtctttgtcatgatctcggtcatgggccattttctcatatgttcgatggaaga
tttattccacttgctcgcccagatgtgaaatggacgcatgaacagggctcggttatgatg
tttgagcacctagttaattctaacggactcagagatgtcatggaacagtatggtctcatc
cctgaagaagatatttggtttatcaaggaacaaattacaggaccacctgagtcacccatc
aaagattcttcaaagtggctatataaagggcgtcctaaagaaaaaagcttcctttatgag
atagtggccaataaaagaaatggcattgatgtggacaaatgggattattttgccagggac
tgccatcatcttggaatccaaaataattttgattacaagcgctttattaagtttgcccgt
gtctgtgaggtagatgataggaagcacatttgtactagagaaaaggaggttggaaacctg
tatgacatgttccacacacgcaactctttgcatcgcagagcttatcaacacaaagttggc
aacatcattgatacaatgattacagatgccttcctcgaagcagacccttacatagagata
acaggttctgaaggaaaaaagtatcacatttctacagcaattgatgacatggaagccttc
actaagctgacagataacatttttctggagattttatactctgctgatcccaaattggat
gctgcacgagcgattttaaagaaaattgaatgccgtaatctatacaagtttgtgggtgag
actcagcctataggacaaataaagattaaaagggaaaactacgaaagccttccgaaaggg
gtcgccagtgctaaacccagtgacatggtgctagaacctgaactgaaggctgaagatttc
atagtggatgttatcaacatggattatggaatggaagacaagaatcctattgatcatgtt
cgcttctattgtaagagtgagcccagccaggcaatcatgattactaaaaatcaggtttca
cagtttttgccagaggtatttgctgagcagctgattcgagtttattgtaagaagacggat
aaaaggagtctctacgctgcacaacagcatttcgttcagtggtgtttaatcaatgacttc
accaagccacaggatggtgatattgtagctccacttataacacctcgaaaatcggagtgg
aattacacagattcagcccagagtccagctcacacccgagaagcatccaaatgcagagcc
cagctttttcgagatggttcagtgtga
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