Orcinus orca (killer whale): 101271832
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Entry
101271832 CDS
T05247
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X2
KO
K19749
retinoic acid-induced protein 1
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oor03000
]
101271832 (RAI1)
Transcription factors [BR:
oor03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101271832 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
101271832
NCBI-ProteinID:
XP_033278572
LinkDB
All DBs
Position
19:complement(19884698..19990491)
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AA seq
1936 aa
AA seq
DB search
MQSFRERCGFHGKQQTYQQTSQETSRLENYRQPSQAGLSCDRQRLLTKDYYGPQPFPSYE
GGAGTPATAARASKGLSSPQAAQGRPSFAGYAVQDGSPYPGRYSGEEGLQAWGAPQPPPP
QPQPLPGAVGKYDENLMKKTAAPPARQYPEQGAQLPFRTHTLHVQQQLSQPLAYPKLQRQ
KPQNDLASPLPFPPGSHFPQQSQSFPVSSTYSSTGQGGGQGAHSYKSCTAPSTQPHDRPL
TANAGLAPGQRVPSLHAYQPGRLSYEPQKQQQQQALQSRHHAQETLHYQSLTKYQHYGQQ
GPGYCQPDAAVRTPEQYYQTFSPGSSHSPARSVGRSPSYSSTPSPLMPNLENFPYNQQPL
GPGAFPAGLADHSHFLPLLNPSPTDAAGSVDAQAANCKALQKDKLPESLLSDLSLHSLTA
LTSQVENISNTVQQLLLSKAAMPQKKGVKSLAARTPEQHKSQHCSPEGSGYSAEPAGTPL
SEPLSSTPQSTHAEPPEADYLSGSEDPLERSFLYCSQARGSPARVHGSSKAKPESVSTCS
VTSPDDMSTKSDDSFQSLHGSLPLDSFSKLVAGERDCPRLLLSALAQEDLASEILGLQEA
ISEKADKVWAEAPGLAKDTGKPPFSLENHSACLDPMAKGAWPRPGEQDALPEALQLEKGS
GTKDFGPGLFEDPSVGFATPDPKKTTGPLSFGAKPTLGAAASDPATAAFDCFPDTTAASS
ADSANPFAWPEENLGDACPRWGLHPSELAKGLEQGGKATDSVGQEDAREASACLGFQEEQ
PSAEKAVVPRDSQQEEGGGVKEEAGGLLQCPEVGKADRWLEDSRHCCSAADFGDLPLLPP
AGRKGDLEAEEYSSLCELLGSPEQRPGLQDPLSPKAPLLCGKEEVEEVLDPKAGWGSPCA
LSGESVILLGPTVGTESKVQSWFESSLSHMKPGEEGPEGALAPGHSTALAPEASLTQKPN
KPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLPESCTGPPQGQ
MEGAGAPGRGTSEGLPRMCTRSFTALSEPRTPGPPGLPTTPAPPDKLGGKQRAAFKSGKR
VGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPDAPGKDQRSMILRSRTRTQEAFH
CKRRRASESRLPNCRAAKKLLANNHLPATFKVAGSPQKEGRAGQRARVPKPGAGGKLSDR
PLHTLKRKSAFMAPVPTKKRNLVLRSGSTSGDTKEEGAEGPPTLFKRMTSPKKAKPTKGN
GEPTAKPPPPETPDASLKLASRASVQGAMKTKVLPPRKGRGLKLEAIVQKITSPSLKKFA
CRAPGAPPGNPLSPSLPEKDRGLKSAGGSPLGAEEGLLNVSTGQKFPAALGADPLCRNPT
NRSLKGKLVNNKKLSSTDGFKTEAFTSPEALLPGGTALAPKKRSRKGRAGALGLPKGSLE
KRPHLGPALLLTASSTQGGSEDSPGGGGKKPKMEELGLASQPPEGRPCQPQVRAQKQPGH
ANYSSYSKRKRLTRGRAKNATTSPCKGRAKRRRQQQVLPLDPAEPEIRLKYISSCKRLRA
DSRTPAFSPFVRVEKRDAFTTVCTVVNSPGDEPKPHRKPSSSSSSCSSSLDAAGASLATL
PGGSVLQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPGHCL
PKKKPKLKEKVRPESTYEEASLPLERTLKGLECPAAAAATTTATTGKPPRPDGPADPAKQ
GSLRTSARGLSRRLQSCYCCDGRGEGGEETAPADRSRKHECSKEPPAEPGGDAQEHWVHE
ACAVWTGGVYLVAGKLFGLQEAMKVAMDMTCSSCQEAGATIGCCHKGCIHTYHYPCASDA
GKSQPKGTEGRGTQAQLLELTPLDPSASPFSCPSNSLPSHVSRLGPELGSAGDKETRPSP
ATCWRRAQKHKVESCM
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagacctaccagcagacc
tcacaggagacatctcgcctggagaattaccggcagccgagtcaggctgggctgagctgc
gaccggcagcgtctgctgaccaaggactattacggcccgcagcccttccccagctacgag
ggcggcgccggcacgcccgccacggcggcgcgcgccagcaaaggcctgtcctcgccgcag
gccgcgcaggggaggccgtccttcgcgggctacgccgtccaggacggcagcccctacccc
ggccgctactcgggggaggagggcctgcaggcctggggggcgccgcagccaccacccccg
cagccgcaacccctgccaggggcggtgggcaaatatgacgagaacctgatgaagaagaca
gcagcgccccccgcccggcagtacccagagcagggcgcccagctgccctttcggactcac
accctccacgtccagcagcagctgtcgcagcccctggcttaccccaagctccaaaggcag
aaaccccagaacgacctcgcctcgcccctgcccttccccccgggcagccacttcccccag
cagtcccagtccttccccgtctcctccacctactcctccaccggccagggtggcgggcag
ggggcccactcctacaagagctgcacggccccgtccacccagccccacgacaggcctctg
accgccaacgccggcctggccccaggccagcgggtcccgagccttcacgcctaccagcct
gggcgcctcagctacgagccacagaagcagcagcagcagcaagccctccagagccgccac
cacgcccaggagaccctccactaccagagcctcaccaagtaccaacactacgggcagcag
ggccccggctactgccagccggacgcggccgtcaggaccccggagcagtactaccagacc
ttcagccccggctccagccactcgcccgctcgctccgtgggccgctccccttcctacagc
tccaccccgtcgccgctgatgcccaacctggagaactttccctacaaccagcagccgctt
ggccctggagccttccccgccggtctcgcggaccacagccacttcctgcccctgctcaac
ccctccccgacggacgccgccggctccgtggatgcccaggccgccaactgcaaggcccta
cagaaggacaagcttcccgagagcctgctgtcagacctgagcctgcacagcctcacggcg
ctgacctcgcaggtggagaacatctccaacactgtgcagcagctgctgctctccaaggcg
gccatgccccagaagaagggcgtcaagagcctggcggcccggaccccggagcagcacaag
agccagcactgcagccccgagggcagcggctactcggccgagccggcgggcacgccgctg
tcggagccgctgagcagcaccccgcagtccacgcacgccgagccgcccgaggccgactac
ctgagcggctccgaggacccgctggagcgcagcttcctctactgcagccaggcccgcggc
agccccgccagggtccacggcagctccaaggccaagcccgagtccgtgtccacctgctct
gtgacttcgcccgacgacatgtccaccaagtccgatgactccttccagagcctgcacggc
agcctgccgctcgacagcttctccaagctcgtggctggcgagcgggactgcccgcgcctg
ctgctcagcgccctggcacaggaggacctggcctccgagatcctggggctgcaggaggcc
atcagcgagaaggccgacaaggtctgggccgaggcgcccggcctggccaaggacaccggc
aagccgcccttctcgctggagaaccacagcgcctgcttggaccccatggccaagggtgcg
tggccgcggccgggggagcaggacgccctgcccgaggccctacagctggagaagggcagc
ggcaccaaggacttcggcccagggctgttcgaagatccctccgtgggcttcgccacccct
gaccccaagaagacaactggtcccctctcctttggtgccaagcccacgctgggggccgcc
gcctcggaccccgccacggcggctttcgactgctttccagacacaaccgccgccagctcg
gcggacagcgccaaccccttcgcctggcccgaggagaacctgggggacgcctgtccccgg
tgggggctgcaccccagcgagctcgccaagggcctggagcagggcgggaaggccaccgac
agcgttggccaggaggacgcccgcgaggcttcggcctgcctgggcttccaggaggagcag
ccctcggcggagaaggccgtggtgccccgggactcccagcaggaggaggggggaggggtg
aaggaggaggcgggcgggctgctgcagtgtcccgaggtgggcaaggccgaccggtggctg
gaggacagccggcactgctgctccgccgctgacttcggagacctcccgttgctgccgccc
gccggcaggaagggggacttggaggcggaggagtactcgtctctgtgcgagctcctgggc
agccccgagcagaggccgggcctgcaggacccgctgtcgcccaaggccccactgctgtgt
ggcaaggaggaggtggaggaggtgctggaccccaaggccggctggggctccccgtgtgcc
ctgtctggcgagtccgtcatcttgctgggccccaccgtgggcaccgagtccaaggtgcag
agctggttcgagtcctccctctcccacatgaagccaggggaagaggggcccgagggggcg
ctggccccagggcattccaccgccctggccccggaagcctccctgacccagaagccgaac
aagcccgctgtgcccgaggcgcccatcgccaagaaggagcccgtgcctcgcggcaaaagc
ttacggagccggcgggtgcaccgggggctgcccgaggccgaggattccccgtgcagggcc
ccggcgctgcccaaagacctgctgctccctgaatcgtgcacgggccccccccagggacag
atggaaggggcgggggccccaggccgggggacctcggaagggctccccaggatgtgcacc
cgctccttcacggccctgagtgagccccgcacgcccggacccccaggccttcccaccacc
cctgcccccccagacaagctggggggcaagcagcgagctgccttcaagtcgggcaagcgg
gtggggaagccctcccccaaggccgcatccagccccagcaacccggctgccctgcctgtg
gcctccgacagcagccccatgggctccaagaccaaggagacagactcgccggatgcacca
ggcaaagaccagcgctccatgatcctccggtcccgcaccaggacccaggaggccttccac
tgcaagcggcggcgggcctcggagagccggctccccaactgccgcgccgccaagaagctc
ctcgccaacaaccacctgcccgccacgttcaaggtcgccggtagcccccagaaggagggc
agggcgggccagcgggcaagggtccccaagcctggtgcaggcggcaagctctccgatcgg
cccctccacaccctcaagaggaagtcggccttcatggcacctgtccccaccaagaagcgc
aacctggtcttacgcagcggcagcaccagcggggacacgaaggaggagggggccgagggc
cctcccaccctcttcaagaggatgacgtctcccaagaaggccaagcccaccaagggcaac
ggtgagcccacggcaaagccgccgcccccggagacccctgacgccagcctgaagctggcc
tcacgggcgtccgtccagggggccatgaagaccaaggtgctgcccccccggaaaggccgg
ggcctgaagctggaggccatcgtgcagaagatcacctcgcccagcctgaaaaagttcgcg
tgcagagcaccgggggcccctcccgggaatcctctgagcccatccctccccgagaaggac
cgcgggctcaagagcgcagggggcagcccgctgggggcagaagaaggtctcttaaacgtg
agcactgggcagaagttcccagcagccttgggggccgatccgttatgcagaaatccgacc
aacagatccttaaaaggcaaactcgtgaacaataagaaactgtcctcgaccgacggtttc
aaaactgaggccttcacatccccagaggccctactgcccgggggcactgccctggcacct
aagaagagaagccggaaaggcagggctggagccctcggactccccaaaggctccctggag
aagaggcctcatctcggcccagctctgctcctgacggccagcagcacgcaggggggcagc
gaggacagccctggcggaggaggcaagaagccaaagatggaggagctggggctggcctcc
cagccccctgagggccggccctgccagccccaggtgagggcacagaagcagcctggccat
gccaactacagcagctattccaagcggaagcgcctgacgcggggccgggccaagaacgcc
accacctcaccctgtaaggggcgtgccaagcggcggcggcagcagcaggtgctgcccctg
gatcccgcagagcctgaaatccgcctcaaatacatttcctcctgcaagcggctgcgagca
gacagccgcacccccgccttctcgcccttcgtgcgggtggagaagcgggatgcgttcacc
accgtatgcactgttgtcaactcccccggagacgagcccaagccccacaggaagccttcc
tcctcttcatcctcttgctcctcctccttggacgcggccggggcctccctagccacgctc
cctggaggctccgtcctgcagcctcggccctccctgcccctctcctccaccatgcatctg
gggcccgtggtctccaaggccctgagtacctcttgccttgtttgctgcctctgccaaaac
ccagccaacttcaaggacctcggggacctctgtgggccctactaccccggacactgcctc
cccaaaaagaagccaaaactcaaggagaaggtgcggccagagagcacctacgaggaggcc
tcgctgcctcttgagaggacactcaaaggcctcgagtgcccagctgccgctgccgccacc
accaccgccaccaccgggaagccccccaggcctgacggcccagccgatccagccaagcag
ggctccctgcgcaccagcgcccggggcctgtcccggcggctgcagagttgctactgctgt
gacggtcggggggaaggtggtgaagagacagccccagctgacaggagccgcaagcacgag
tgcagcaaggagccgccggcagagcctggcggggacgcacaggagcactgggtgcacgag
gcctgcgccgtgtggacgggcggggtctacctggtggccgggaagctctttgggctgcag
gaggccatgaaggtggccatggacatgacttgttccagctgccaggaagccggggccacc
atcgggtgctgccacaaaggatgcatccacacctaccattacccatgtgccagcgatgcg
ggtaagagccagcccaaggggaccgaaggtcgggggacgcaggcacagctcctcgagctg
accccacttgacccgtcggcttcccccttctcctgccccagcaattctttaccttctcat
gtctctcggctgggccctgagctgggcagtgctggtgacaaggagacacgtccgtcccca
gccacctgctggaggagggcccagaagcacaaagtggaaagctgtatgtga
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