Orcinus orca (killer whale): 101271861
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Entry
101271861 CDS
T05247
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oor03021
]
101271861 (TAF1B)
Transcription machinery [BR:
oor03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
101271861 (TAF1B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF7339
DUF4661
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
101271861
NCBI-ProteinID:
XP_004274943
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All DBs
Position
13:complement(84691636..84750702)
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AA seq
590 aa
AA seq
DB search
MDLEEAKEFKDRCSQCAAVSWGLTDEGKYYCTSCHNVTERSREVINTGAIPNTKIQAINR
GLKRKRKLEKGWDWYVCEGFQHILYQQAKALQILGVGPELKNEVLHNFWKRYLQKSKQAY
CKNPVYTSRRKTTVLEDNPSHSDWDSEPELLSDLSCPSFVESGAESQPDVHTQKPFPIIK
ASQSETASVCSGSLDGVEYSLRKEKGIVKMTVPRTLAFCYLSLLWQRETITLADLLRFVE
EEHIPYINAFQHFPEEMKLYGRDKGIFAIESWPNYEDIYKKVIEVATFLDLPRFPDITED
CYLHPNILCMKYLMEVNLPDEMHDLTCHVVKVTGMGEVDFLTFDPIAKKAKAVKYDVQAV
AVIVVVLKLLFLLDDNLEWSLSNIAEKYNEKNEEDKPWFDFRKWYQVMKKAVDEKKQKWE
EARAKYLWKSEKPLYHSAIDRSVVYKRREMVVSLQKQFSTLVGSTPTVEKQSPSSFQFSW
TEEGSDRTCFHGHSLQGVLKQKGQSLMTKNSLYWLSTQKFCKSYCKHVTTYEESNFSLSY
QFILNLFSFLLRIKTSLLHEEVSLIEKRLFKAKYSTTNKKSSRSRKARKC
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggacctggaggaggcgaaagagttcaaagaccgttgttctcagtgtgctgctgtctct
tggggtctcactgatgaaggcaaatattattgcacttcttgccacaatgttacagaaaga
tctagggaagttataaacactggggctattcctaatactaaaatacaagccatcaaccgg
ggacttaaaagaaaacgaaaacttgagaaaggctgggattggtatgtgtgcgaaggtttt
cagcacatactttatcaacaagcaaaagccttacagatccttggagtaggcccagagtta
aagaatgaagttttacataatttttggaagcgctaccttcagaagagcaagcaggcatat
tgtaaaaacccagtttataccagtagaaggaaaactacggtattagaagataatccaagt
cattcagactgggacagtgagcctgagctgctgagtgacctgagctgtccttcttttgtt
gaaagtggagcagaatctcagcctgatgtccacactcaaaagcctttccccatcatcaaa
gcatcacaatcagaaacagcatctgtctgttctggatctcttgacggagttgagtattca
ctgcgaaaggagaagggaattgtgaagatgactgtgccacggacgctagctttctgctac
ctgtcattgctttggcagagggagacaatcactcttgcggatcttctgagattcgttgaa
gaggaacatattccttatataaatgcttttcagcattttccagaagagatgaaattatat
gggcgtgacaaaggaatctttgctatagagtcttggcctaactatgaagatatctataaa
aaagtaattgaagttgccacatttttagatttgccacgttttccagacataactgaagac
tgctatcttcatccaaacatcttgtgtatgaaatacttgatggaagtcaatctccctgat
gaaatgcatgatttaacctgccacgtggtaaaagtgactggaatgggagaagtggatttt
ctaacattcgatcctatagctaaaaaggcaaaagctgttaaatatgatgtacaagctgta
gctgtcattgtggtggtattgaaactgctctttttattggatgacaatttagaatggtct
ttgtctaatattgctgagaaatataatgaaaagaatgaagaagataagccatggtttgat
ttcagaaaatggtaccaagttatgaagaaagctgttgatgaaaaaaaacaaaaatgggag
gaagccagggcaaagtatctatggaaaagtgaaaagccactctaccactcagcgattgac
agatcagtggtatataaaagaagggaaatggtcgtgagtctacaaaaacaatttagcaca
ctggttggttcaacaccaactgttgaaaaacaaagcccttcaagttttcagttcagctgg
accgaagagggcagtgatagaacttgtttccatgggcatagcctccagggagtcctgaag
cagaaaggccagtcactgatgaccaagaattccctctattggctgagtactcagaaattc
tgtaaaagctattgtaagcatgtgacaacctacgaagaatcaaatttctctctgagttat
cagtttatactaaatctcttctccttcttgctaagaataaagacctcccttctccatgaa
gaagtgagcttaatagaaaagagactttttaaagcaaaatacagtacaacaaacaagaaa
tcttcaagatccaggaaagcaagaaaatgttga
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