Orcinus orca (killer whale): 101272070
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Entry
101272070 CDS
T05247
Symbol
PDS5A
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
oor
Orcinus orca (killer whale)
Pathway
oor04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101272070 (PDS5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101272070 (PDS5A)
03400 DNA repair and recombination proteins [BR:
oor03400
]
101272070 (PDS5A)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
101272070 (PDS5A)
DNA repair and recombination proteins [BR:
oor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
101272070 (PDS5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
101272070
NCBI-ProteinID:
XP_049564733
LinkDB
All DBs
Position
4:90487171..90614614
Genome browser
AA seq
1399 aa
AA seq
DB search
MDFSTAQPKPAPALCGVVSADGKIAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDS
EDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLF
ITRQLKGLEDTRSPQFHRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSH
NRKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTI
EACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEER
LAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAK
DLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAM
MGLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLE
TEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKL
MTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLAN
PKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRSG
LELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRST
LIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQLAQIFEPLSRSLNADVPEQLITPLVS
LGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAI
KLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAIMKL
AQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKD
PVKERRAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQ
DVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTKDAQSPDESKTNEKLYTVC
DVALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFCNDKSYISEETRVLLLTGKPKPAG
VLGAVNKPLSATGRKPYVRSTGAETGSNINVNSELNPSTGNRSREQSSEAAETGVSENEE
NPVRIISVTPVKNIDPVKNKEVNSDQAAQGNISSDRGKKRTVTAAGAENIQQKTDEKVDE
SGPPAPSKPRRGRRPKSESQGNATRNDDINKPLSKGRKRAAVNQESPGGLEAGNAKAPKL
QDIAKKAAPAERQIDLQRSQVLGSDGDSLWDIESSPGNSSSDLDRLKVCESSQEDTEDSE
LVKGSFLKVKRKFICKGRK
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcgaccgcgcagcccaagcctgcccctgccctctgtggcgttgtgagtgcc
gacgggaagatcgcttaccctccgggggtaaaggagatcaccgacaagatcaccaccgac
gaaatgatcaaacgactgaagatggtagtcaaaacttttatggatatggatcaggattca
gaagatgaaaaacagcagtatctcccactagccttgcatctagcatctgaattttttctc
aggaatcccaataaagatgtgcgtctccttgtagcatgctgtttggctgacatctttaga
atctatgccccagaagctccatatacttcccacgataaacttaaggacatatttttgttt
attaccagacaattaaagggtttggaggatacaaggagcccgcagtttcatagatacttt
tatttattagagaatttagcttgggttaaatcatataacatctgctttgaattggaagat
tgcaatgaaatttttattcagctttttaggactctcttctcagtgatcaacaatagccac
aataggaaggtacaaatgcacatgctagacttgatgagttctatcatcatggaaggtgat
ggagttactcaagaattattggactccattcttattaacctcattcctgcacataagaac
ttaaataaacagtcctttgacctcgcaaaagtcctattgaaaaggacagtccagactatt
gaggcatgcattgccaattttttcaatcaagtcctggtgctgggaagatcatcagtaagt
gatttgtcagaacatgtatttgatctgattcaggaactttttgctatagatcctcattta
ttattatctgtcatgccgcagcttgaattcaaactgaagagcaatgatggagaagagcga
ttagctgttgttcgacttttagctaaattgtttggttctaaagattccgatttggcaaca
cagaatcgtcctctgtggcagtgttttcttggacgattcaatgacattcacgttcctgtg
agattagaaagtgtgaaatttgcgagtcactgtttaatgaatcacccagatttagcaaag
gatctcacagaatacttgaaagttagatcacatgatccagaagaagctattcgtcatgat
gtcattgttactataataacagctgccaaaagagaccttgccttagtaaatgatcagcta
cttggctttgtaagagaaagaacactggacaaacggtggcgagtaagaaaagaagctatg
atgggtctggctcagctttataagaaatactgtcttcatggtgaagcaggaaaggaagct
gcagagaaagtcagctggataaaggacaaacttttgcatatatattatcagaatagcatc
gatgacaaactgttggtagagaaaatctttgctcagtatcttgtcccccacaacctggaa
acagaagagagaatgaaatgcttgtattatttatatgctagtttggatccaaatgctgtc
aaggctctcaatgaaatgtggaagtgtcagaacatgcttagaagtcatgtacgagaacta
ttggatttgcacaagcagcctacgtctgaggctaactgttctgccatgtttggaaaactg
atgaccatagcaaagaatttgcctgaccctgggaaagcacaagattttgtgaagaaattt
aaccaagtccttggtgatgatgaaaaactgcggtctcagttggagttgttaatcagtcca
acctgttcgtgcaaacaggcagatgtttgtgtgagagaaatagcccggaaacttgcaaat
cctaagcagccaacaaatccttttctagaaatggtcaaatttctgttggaaagaattgca
cctgtgcacattgattcagaagccatcagtgcactggtaaaactaatgaataaatcaata
gaggggacagcagatgatgaagaggagggtgtaagtccagatacagctattcgttcagga
cttgaacttcttaaggttctgtctttcacacatcctacctcgttccactctgcagagaca
tatgagtccctgttacagtgcctcagaatggaagatgacaaggtagcagaagctgctata
caaatttttagaaatacaggccacaaaatagaaacagacctaccccagatacgatcgacc
ttaattcccatcttacatcagaaagcaaagagaggtactccccaccaagcaaaacaggcc
gttcactgtatacatgccatattcacaaataaagaagtacagcttgcacagatttttgag
ccactcagtaggagtctcaatgctgatgtaccagaacaacttataactccattagtttca
ttgggccacatatctatgttagcaccagatcaatttgcttccccaatgaaatctgtagta
gcaaattttattgtgaaagatctgctaatgaatgacaggtcaacaggtgagaagaatggg
aaattatggtctccagatgaagaggtttcccctgaagtactagcaaaggtacaggcaatt
aaacttctggtaaggtggctgttgggtatgaaaaacaaccagtctaaatctgccaattca
actcttcggttattatcagcgatgttggttagtgagggtgacctgacagagcaaaagaag
atcagtaaatctgatatgtctcgcttgcgattagctgctggtagtgccataatgaagctt
gctcaggaaccttgttaccatgaaattataaccccagaacagtttcagctctgtgcgctt
gttattaatgatgagtgctatcaagtaaggcagatatttgctcagaagctacataaggca
cttgtgaagttactcctcccattggagtatatggcgatctttgccttgtgtgccaaagat
cctgtgaaggagagaagagcacatgcacgacagtgtttactaaaaaatatcagtatacgc
agggagtacattaaacagaaccccatggctactgagaaattattatcactgttgcctgag
tatgtagttccgtatatgattcacctgctagcccatgatccagattttacaagatcacaa
gatgttgatcaacttcgtgatattaaagagtgcctgtggttcatgcttgaagttttaatg
acaaagaatgaaaataacagccatgcctttatgaaaaagatggcagagaacatcaagcta
acaaaagatgcccagtctccagatgaatccaagacaaatgaaaaactttatacagtgtgt
gatgtggccctgtgtgttataaatagtaaaagtgctttatgcaatgcagattcaccaaag
gatccagtccttccaatgaaattttttacacaacctgaaaaggacttctgtaatgacaag
agttatatttcagaagagacaagagtacttctgttaacaggaaagccaaaacctgctgga
gtactaggtgcggtaaacaagcctttatcagcaacgggaaggaaaccatatgttagaagc
actggagctgagactggaagcaatattaatgtaaattcagagctgaacccttccaccgga
aatcgatcaagggaacagagttcagaggcagcagaaactggagttagtgaaaatgaagag
aaccctgtgagaattatttctgtgacacctgtaaagaatattgacccagtaaagaataag
gaggttaattctgatcaggctgcccagggcaacatcagcagtgaccgaggaaagaaaaga
acagtaacagcagctggtgcagagaatatccaacaaaaaacagatgagaaagtagatgaa
tcaggaccacctgccccttcaaaacccaggagaggacgtcgacccaagtctgaatctcag
ggcaatgcaaccagaaatgatgatataaataaacctcttagcaagggaagaaagagagcc
gcagtcaatcaggaaagccctggaggtttggaagcaggtaatgccaaagcacccaaactg
caagacatagccaaaaaggcagcaccagcagagagacaaattgacttacaaagaagccaa
gtgctcggaagtgatggcgattcactttgggacatagaatcaagtccaggaaattcttcc
agtgatctggatcgtttaaaagtctgtgagagcagccaggaagatactgaggactcagag
ctagtaaagggaagcttcctgaaggtaaaaagaaaattcatttgcaaagggagaaaatga
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